Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.28□□□□□ -0.28
CNOT4O95628 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.28□□□□□ -0.28
CNOT4O95628 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.28□□□□□ -0.28
CNOT4O95628 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.28□□□□□ -0.28
CNOT4O95628 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.28□□□□□ -0.28
CNOT4O95628 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.28□□□□□ -0.28
CNOT4O95628 GOLGA2P4-201ENST00000441462 777 ntBASIC13.28□□□□□ -0.28
CNOT4O95628 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.28□□□□□ -0.28
CNOT4O95628 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.28□□□□□ -0.28
CNOT4O95628 AC026434.2-201ENST00000506094 1078 ntBASIC13.28□□□□□ -0.28
CNOT4O95628 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.28□□□□□ -0.28
CNOT4O95628 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.28□□□□□ -0.28
CNOT4O95628 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.28□□□□□ -0.28
CNOT4O95628 MIR3615-201ENST00000581999 87 ntBASIC13.28□□□□□ -0.28
CNOT4O95628 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CNOT4O95628 ECM1P1-201ENST00000604092 1279 ntBASIC13.28□□□□□ -0.28
CNOT4O95628 AC138466.3-201ENST00000619983 221 ntBASIC13.28□□□□□ -0.28
CNOT4O95628 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.28□□□□□ -0.28
CNOT4O95628 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CNOT4O95628 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.28□□□□□ -0.28
CNOT4O95628 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.28□□□□□ -0.28
CNOT4O95628 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.28□□□□□ -0.28
CNOT4O95628 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 AC126335.2-201ENST00000623362 4637 ntBASIC13.28□□□□□ -0.28
CNOT4O95628 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNOT4O95628 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNOT4O95628 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNOT4O95628 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
CNOT4O95628 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CNOT4O95628 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNOT4O95628 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.27□□□□□ -0.28
CNOT4O95628 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CNOT4O95628 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.27□□□□□ -0.28
CNOT4O95628 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.27□□□□□ -0.28
CNOT4O95628 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.27□□□□□ -0.28
CNOT4O95628 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNOT4O95628 REXO1L2P-201ENST00000425429 2069 ntBASIC13.27□□□□□ -0.28
CNOT4O95628 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNOT4O95628 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CNOT4O95628 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.27□□□□□ -0.28
CNOT4O95628 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.27□□□□□ -0.28
CNOT4O95628 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNOT4O95628 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CNOT4O95628 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNOT4O95628 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
CNOT4O95628 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.27□□□□□ -0.28
CNOT4O95628 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.27□□□□□ -0.29
CNOT4O95628 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 AC004945.1-201ENST00000416738 983 ntBASIC13.27□□□□□ -0.29
CNOT4O95628 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.27□□□□□ -0.29
CNOT4O95628 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.27□□□□□ -0.29
CNOT4O95628 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.27□□□□□ -0.29
CNOT4O95628 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.27□□□□□ -0.29
CNOT4O95628 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.27□□□□□ -0.29
CNOT4O95628 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.27□□□□□ -0.29
CNOT4O95628 ZACNP1-201ENST00000612259 710 ntBASIC13.27□□□□□ -0.29
CNOT4O95628 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.27□□□□□ -0.29
CNOT4O95628 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.27□□□□□ -0.29
CNOT4O95628 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.27□□□□□ -0.29
CNOT4O95628 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 AP000593.2-201ENST00000542775 1433 ntBASIC13.27□□□□□ -0.29
CNOT4O95628 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CNOT4O95628 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CNOT4O95628 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CNOT4O95628 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 AC006486.2-201ENST00000624246 2199 ntBASIC13.27□□□□□ -0.29
CNOT4O95628 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.27□□□□□ -0.29
CNOT4O95628 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNOT4O95628 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms