Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF3O95398 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF3O95398 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF3O95398 NQO2-204ENST00000380454 851 ntTSL 2 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 SNORA57-201ENST00000383870 149 ntBASIC21.6■■□□□ 1.05
RAPGEF3O95398 EEF1DP5-201ENST00000431410 772 ntBASIC21.6■■□□□ 1.05
RAPGEF3O95398 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 SKA2-205ENST00000580541 689 ntTSL 3 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 MIR4254-201ENST00000581063 76 ntBASIC21.6■■□□□ 1.05
RAPGEF3O95398 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 MIR6125-201ENST00000618986 96 ntBASIC21.6■■□□□ 1.05
RAPGEF3O95398 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF3O95398 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF3O95398 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF3O95398 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF3O95398 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC21.6■■□□□ 1.05
RAPGEF3O95398 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF3O95398 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF3O95398 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF3O95398 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF3O95398 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF3O95398 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF3O95398 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF3O95398 STK24P1-201ENST00000455035 1291 ntBASIC21.59■■□□□ 1.05
RAPGEF3O95398 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 AC025186.1-201ENST00000478174 870 ntBASIC21.59■■□□□ 1.05
RAPGEF3O95398 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 CES1P2-201ENST00000566467 1242 ntBASIC21.59■■□□□ 1.05
RAPGEF3O95398 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF3O95398 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF3O95398 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF3O95398 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF3O95398 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RAPGEF3O95398 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF3O95398 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF3O95398 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF3O95398 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF3O95398 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF3O95398 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF3O95398 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF3O95398 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF3O95398 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 NRADDP-201ENST00000437305 691 ntBASIC21.58■■□□□ 1.05
RAPGEF3O95398 AC010900.1-201ENST00000449849 1296 ntBASIC21.58■■□□□ 1.05
RAPGEF3O95398 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF3O95398 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 PRSS3P1-201ENST00000503996 742 ntBASIC21.58■■□□□ 1.05
RAPGEF3O95398 AC005740.1-201ENST00000515639 522 ntBASIC21.58■■□□□ 1.05
RAPGEF3O95398 RN7SKP155-201ENST00000516031 288 ntBASIC21.58■■□□□ 1.05
RAPGEF3O95398 MIR2278-201ENST00000516344 96 ntBASIC21.58■■□□□ 1.05
RAPGEF3O95398 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 AC091304.3-201ENST00000566500 716 ntBASIC21.58■■□□□ 1.05
RAPGEF3O95398 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF3O95398 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF3O95398 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF3O95398 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.58■■□□□ 1.05
RAPGEF3O95398 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms