Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.69■□□□□ 0.1
RTN3O95197 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RTN3O95197 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.69■□□□□ 0.1
RTN3O95197 POM121L10P-201ENST00000436994 1285 ntBASIC15.69■□□□□ 0.1
RTN3O95197 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.69■□□□□ 0.1
RTN3O95197 AC104306.2-201ENST00000451877 341 ntBASIC15.69■□□□□ 0.1
RTN3O95197 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.69■□□□□ 0.1
RTN3O95197 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.69■□□□□ 0.1
RTN3O95197 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.69■□□□□ 0.1
RTN3O95197 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.69■□□□□ 0.1
RTN3O95197 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.69■□□□□ 0.1
RTN3O95197 AL022328.3-201ENST00000607943 679 ntBASIC15.69■□□□□ 0.1
RTN3O95197 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.69■□□□□ 0.1
RTN3O95197 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RTN3O95197 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.69■□□□□ 0.1
RTN3O95197 INE2-201ENST00000630399 1874 ntBASIC15.69■□□□□ 0.1
RTN3O95197 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RTN3O95197 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.69■□□□□ 0.1
RTN3O95197 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RTN3O95197 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.68■□□□□ 0.1
RTN3O95197 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.68■□□□□ 0.1
RTN3O95197 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RTN3O95197 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RTN3O95197 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.68■□□□□ 0.1
RTN3O95197 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.68■□□□□ 0.1
RTN3O95197 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
RTN3O95197 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 ACE3P-201ENST00000423435 1973 ntBASIC15.68■□□□□ 0.1
RTN3O95197 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 AC020910.5-201ENST00000623668 1865 ntBASIC15.68■□□□□ 0.1
RTN3O95197 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.68■□□□□ 0.1
RTN3O95197 AC006033.1-201ENST00000440505 426 ntBASIC15.68■□□□□ 0.1
RTN3O95197 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 AC100850.1-201ENST00000506768 649 ntBASIC15.68■□□□□ 0.1
RTN3O95197 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.68■□□□□ 0.1
RTN3O95197 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.68■□□□□ 0.1
RTN3O95197 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.68■□□□□ 0.1
RTN3O95197 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.68■□□□□ 0.1
RTN3O95197 AC243960.2-201ENST00000600996 747 ntBASIC15.68■□□□□ 0.1
RTN3O95197 AL118558.3-201ENST00000607414 1079 ntBASIC15.68■□□□□ 0.1
RTN3O95197 AL358472.3-201ENST00000608147 415 ntBASIC15.68■□□□□ 0.1
RTN3O95197 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RTN3O95197 AL136301.1-201ENST00000615830 422 ntBASIC15.68■□□□□ 0.1
RTN3O95197 AL008638.5-201ENST00000623814 1298 ntBASIC15.68■□□□□ 0.1
RTN3O95197 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.68■□□□□ 0.1
RTN3O95197 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RTN3O95197 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.68■□□□□ 0.1
RTN3O95197 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RTN3O95197 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.68■□□□□ 0.1
RTN3O95197 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN3O95197 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RTN3O95197 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN3O95197 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RTN3O95197 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN3O95197 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RTN3O95197 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 AC020907.1-201ENST00000616460 1350 ntBASIC15.67■□□□□ 0.1
RTN3O95197 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms