Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.93□□□□□ -0.02
RFPL1O75677 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
RFPL1O75677 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RFPL1O75677 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.93□□□□□ -0.02
RFPL1O75677 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RFPL1O75677 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.93□□□□□ -0.02
RFPL1O75677 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
RFPL1O75677 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.93□□□□□ -0.02
RFPL1O75677 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RFPL1O75677 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.93□□□□□ -0.02
RFPL1O75677 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.93□□□□□ -0.02
RFPL1O75677 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
RFPL1O75677 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.93□□□□□ -0.02
RFPL1O75677 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 AC104596.2-201ENST00000512793 793 ntBASIC14.93□□□□□ -0.02
RFPL1O75677 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.93□□□□□ -0.02
RFPL1O75677 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 AP005482.1-201ENST00000563722 1273 ntBASIC14.93□□□□□ -0.02
RFPL1O75677 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.93□□□□□ -0.02
RFPL1O75677 AL049840.4-201ENST00000602422 811 ntBASIC14.93□□□□□ -0.02
RFPL1O75677 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.93□□□□□ -0.02
RFPL1O75677 AC133552.6-201ENST00000613406 534 ntBASIC14.93□□□□□ -0.02
RFPL1O75677 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.93□□□□□ -0.02
RFPL1O75677 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.93□□□□□ -0.02
RFPL1O75677 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
RFPL1O75677 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.93□□□□□ -0.02
RFPL1O75677 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 RN7SL832P-201ENST00000607781 1756 ntBASIC14.93□□□□□ -0.02
RFPL1O75677 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RFPL1O75677 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 MYADML-201ENST00000474610 2147 ntBASIC14.92□□□□□ -0.02
RFPL1O75677 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.92□□□□□ -0.02
RFPL1O75677 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL1O75677 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL1O75677 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.92□□□□□ -0.02
RFPL1O75677 BOLA2P3-201ENST00000404566 256 ntBASIC14.92□□□□□ -0.02
RFPL1O75677 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
RFPL1O75677 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL1O75677 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RFPL1O75677 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.92□□□□□ -0.02
RFPL1O75677 VDAC1P7-201ENST00000462417 847 ntBASIC14.92□□□□□ -0.02
RFPL1O75677 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 TMEM198B-204ENST00000484016 896 ntBASIC14.92□□□□□ -0.02
RFPL1O75677 AC092658.1-201ENST00000505836 891 ntBASIC14.92□□□□□ -0.02
RFPL1O75677 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.92□□□□□ -0.02
RFPL1O75677 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 RARRES2P5-201ENST00000564013 466 ntBASIC14.92□□□□□ -0.02
RFPL1O75677 AC015936.2-201ENST00000593177 259 ntBASIC14.92□□□□□ -0.02
RFPL1O75677 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.92□□□□□ -0.02
RFPL1O75677 TMEM261P1-201ENST00000604899 340 ntBASIC14.92□□□□□ -0.02
RFPL1O75677 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.92□□□□□ -0.02
RFPL1O75677 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.92□□□□□ -0.02
RFPL1O75677 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL1O75677 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL1O75677 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL1O75677 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL1O75677 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RFPL1O75677 AC005252.3-201ENST00000623855 2258 ntBASIC14.91□□□□□ -0.02
RFPL1O75677 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms