Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN11O75508 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.1■□□□□ 0.01
CLDN11O75508 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.1■□□□□ 0.01
CLDN11O75508 AL157407.1-201ENST00000435784 904 ntBASIC15.1■□□□□ 0.01
CLDN11O75508 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN11O75508 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN11O75508 RNMTL1P1-201ENST00000454103 560 ntBASIC15.1■□□□□ 0.01
CLDN11O75508 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.1■□□□□ 0.01
CLDN11O75508 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN11O75508 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN11O75508 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN11O75508 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN11O75508 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN11O75508 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN11O75508 AC022748.3-201ENST00000621828 275 ntBASIC15.1■□□□□ 0.01
CLDN11O75508 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN11O75508 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
CLDN11O75508 OR2I1P-209ENST00000641730 5365 ntBASIC15.1■□□□□ 0.01
CLDN11O75508 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLDN11O75508 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLDN11O75508 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN11O75508 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLDN11O75508 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN11O75508 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN11O75508 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN11O75508 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN11O75508 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN11O75508 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.09■□□□□ 0.01
CLDN11O75508 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN11O75508 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN11O75508 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN11O75508 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN11O75508 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CLDN11O75508 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.09■□□□□ 0.01
CLDN11O75508 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN11O75508 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN11O75508 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN11O75508 KLF2P1-201ENST00000447438 1042 ntBASIC15.09■□□□□ 0.01
CLDN11O75508 KRT8P13-201ENST00000463294 1010 ntBASIC15.09■□□□□ 0.01
CLDN11O75508 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN11O75508 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN11O75508 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN11O75508 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN11O75508 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN11O75508 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 Z98259.2-201ENST00000641583 609 ntBASIC15.09■□□□□ 0.01
CLDN11O75508 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN11O75508 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLDN11O75508 CICP24-201ENST00000605464 2705 ntBASIC15.09■□□□□ 0.01
CLDN11O75508 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN11O75508 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN11O75508 AC126755.1-201ENST00000525846 6405 ntBASIC15.09■□□□□ 0.01
CLDN11O75508 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN11O75508 AC004899.1-201ENST00000424687 1714 ntBASIC15.09■□□□□ 0.01
CLDN11O75508 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN11O75508 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN11O75508 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN11O75508 AGGF1P1-201ENST00000509500 2073 ntBASIC15.08■□□□□ 0.01
CLDN11O75508 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN11O75508 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms