Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.73□□□□□ -0.69
PAX4O43316 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
PAX4O43316 AC093525.8-201ENST00000624099 1342 ntBASIC10.73□□□□□ -0.69
PAX4O43316 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
PAX4O43316 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
PAX4O43316 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
PAX4O43316 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
PAX4O43316 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC10.73□□□□□ -0.69
PAX4O43316 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
PAX4O43316 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.73□□□□□ -0.69
PAX4O43316 LRRC59-203ENST00000576448 1531 ntBASIC10.73□□□□□ -0.69
PAX4O43316 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
PAX4O43316 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC10.73□□□□□ -0.69
PAX4O43316 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PAX4O43316 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.72□□□□□ -0.69
PAX4O43316 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC10.72□□□□□ -0.69
PAX4O43316 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC10.72□□□□□ -0.69
PAX4O43316 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 AL359258.3-201ENST00000622910 2331 ntBASIC10.72□□□□□ -0.69
PAX4O43316 AC090114.2-201ENST00000608477 7054 ntBASIC10.72□□□□□ -0.69
PAX4O43316 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
PAX4O43316 RPS15-201ENST00000233609 534 ntTSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC10.72□□□□□ -0.69
PAX4O43316 AL691447.1-201ENST00000419456 387 ntBASIC10.72□□□□□ -0.69
PAX4O43316 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC10.72□□□□□ -0.69
PAX4O43316 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.72□□□□□ -0.69
PAX4O43316 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 AC114812.1-204ENST00000449669 728 ntBASIC10.72□□□□□ -0.69
PAX4O43316 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC10.72□□□□□ -0.69
PAX4O43316 LHX6-205ENST00000464484 666 ntTSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC10.72□□□□□ -0.69
PAX4O43316 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC10.72□□□□□ -0.69
PAX4O43316 WASH4P-201ENST00000564273 1246 ntBASIC10.72□□□□□ -0.69
PAX4O43316 PAM16-204ENST00000571941 674 ntTSL 3 BASIC10.72□□□□□ -0.69
PAX4O43316 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC10.72□□□□□ -0.69
PAX4O43316 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC10.72□□□□□ -0.69
PAX4O43316 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC10.72□□□□□ -0.69
PAX4O43316 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 RPS15-205ENST00000586686 562 ntTSL 5 BASIC10.72□□□□□ -0.69
PAX4O43316 RPS15-208ENST00000591804 711 ntTSL 5 BASIC10.72□□□□□ -0.69
PAX4O43316 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC10.72□□□□□ -0.69
PAX4O43316 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC10.72□□□□□ -0.69
PAX4O43316 AL360270.3-201ENST00000609118 1348 ntBASIC10.72□□□□□ -0.69
PAX4O43316 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
PAX4O43316 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
PAX4O43316 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
PAX4O43316 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PAX4O43316 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
PAX4O43316 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms