Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.49■□□□□ 0.07
SOX1O00570 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.49■□□□□ 0.07
SOX1O00570 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SOX1O00570 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SOX1O00570 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.49■□□□□ 0.07
SOX1O00570 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SOX1O00570 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.49■□□□□ 0.07
SOX1O00570 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC15.49■□□□□ 0.07
SOX1O00570 AL773545.2-201ENST00000442149 472 ntBASIC15.49■□□□□ 0.07
SOX1O00570 STK24P1-201ENST00000455035 1291 ntBASIC15.49■□□□□ 0.07
SOX1O00570 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC15.49■□□□□ 0.07
SOX1O00570 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC15.49■□□□□ 0.07
SOX1O00570 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SOX1O00570 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.49■□□□□ 0.07
SOX1O00570 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC15.49■□□□□ 0.07
SOX1O00570 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SOX1O00570 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SOX1O00570 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.49■□□□□ 0.07
SOX1O00570 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SOX1O00570 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC15.49■□□□□ 0.07
SOX1O00570 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.49■□□□□ 0.07
SOX1O00570 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC15.49■□□□□ 0.07
SOX1O00570 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC15.49■□□□□ 0.07
SOX1O00570 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.49■□□□□ 0.07
SOX1O00570 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SOX1O00570 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SOX1O00570 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SOX1O00570 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.49■□□□□ 0.07
SOX1O00570 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC15.49■□□□□ 0.07
SOX1O00570 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.49■□□□□ 0.07
SOX1O00570 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SOX1O00570 AL359258.3-201ENST00000622910 2331 ntBASIC15.49■□□□□ 0.07
SOX1O00570 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SOX1O00570 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SOX1O00570 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.49■□□□□ 0.07
SOX1O00570 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SOX1O00570 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
SOX1O00570 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.48■□□□□ 0.07
SOX1O00570 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
SOX1O00570 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.48■□□□□ 0.07
SOX1O00570 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
SOX1O00570 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SOX1O00570 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.48■□□□□ 0.07
SOX1O00570 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.48■□□□□ 0.07
SOX1O00570 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
SOX1O00570 AL137244.1-201ENST00000422931 865 ntBASIC15.48■□□□□ 0.07
SOX1O00570 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC15.48■□□□□ 0.07
SOX1O00570 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC15.48■□□□□ 0.07
SOX1O00570 RN7SL363P-201ENST00000482412 273 ntBASIC15.48■□□□□ 0.07
SOX1O00570 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.48■□□□□ 0.07
SOX1O00570 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC15.48■□□□□ 0.07
SOX1O00570 AC004801.1-201ENST00000549557 360 ntBASIC15.48■□□□□ 0.07
SOX1O00570 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.48■□□□□ 0.07
SOX1O00570 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC15.48■□□□□ 0.07
SOX1O00570 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC15.48■□□□□ 0.07
SOX1O00570 RN7SL440P-201ENST00000577855 343 ntBASIC15.48■□□□□ 0.07
SOX1O00570 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.48■□□□□ 0.07
SOX1O00570 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC15.48■□□□□ 0.07
SOX1O00570 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC15.48■□□□□ 0.07
SOX1O00570 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC15.48■□□□□ 0.07
SOX1O00570 AP001462.1-201ENST00000594089 452 ntBASIC15.48■□□□□ 0.07
SOX1O00570 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC15.48■□□□□ 0.07
SOX1O00570 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC15.48■□□□□ 0.07
SOX1O00570 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.48■□□□□ 0.07
SOX1O00570 OR3A1-202ENST00000615105 966 ntBASIC15.48■□□□□ 0.07
SOX1O00570 AC245369.7-201ENST00000631386 350 ntBASIC15.48■□□□□ 0.07
SOX1O00570 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.48■□□□□ 0.07
SOX1O00570 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.48■□□□□ 0.07
SOX1O00570 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.48■□□□□ 0.07
SOX1O00570 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.48■□□□□ 0.07
SOX1O00570 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.48■□□□□ 0.07
SOX1O00570 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX1O00570 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
SOX1O00570 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.47■□□□□ 0.07
SOX1O00570 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX1O00570 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.47■□□□□ 0.07
SOX1O00570 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms