Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK1AO00322 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK1AO00322 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK1AO00322 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK1AO00322 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK1AO00322 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UPK1AO00322 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UPK1AO00322 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
UPK1AO00322 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UPK1AO00322 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.08□□□□□ -0.15
UPK1AO00322 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UPK1AO00322 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UPK1AO00322 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UPK1AO00322 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UPK1AO00322 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UPK1AO00322 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.08□□□□□ -0.16
UPK1AO00322 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1AO00322 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
UPK1AO00322 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1AO00322 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1AO00322 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.08□□□□□ -0.16
UPK1AO00322 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
UPK1AO00322 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.08□□□□□ -0.16
UPK1AO00322 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
UPK1AO00322 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1AO00322 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.08□□□□□ -0.16
UPK1AO00322 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 AC025048.6-201ENST00000634326 1161 ntBASIC14.08□□□□□ -0.16
UPK1AO00322 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.08□□□□□ -0.16
UPK1AO00322 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.08□□□□□ -0.16
UPK1AO00322 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1AO00322 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
UPK1AO00322 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.08□□□□□ -0.16
UPK1AO00322 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1AO00322 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
UPK1AO00322 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1AO00322 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.07□□□□□ -0.16
UPK1AO00322 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.07□□□□□ -0.16
UPK1AO00322 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
UPK1AO00322 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UPK1AO00322 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.07□□□□□ -0.16
UPK1AO00322 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
UPK1AO00322 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
UPK1AO00322 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
UPK1AO00322 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
UPK1AO00322 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1AO00322 AC098614.1-201ENST00000368528 745 ntBASIC14.07□□□□□ -0.16
UPK1AO00322 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.07□□□□□ -0.16
UPK1AO00322 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
UPK1AO00322 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.07□□□□□ -0.16
UPK1AO00322 BAATP1-201ENST00000412284 1225 ntBASIC14.07□□□□□ -0.16
UPK1AO00322 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms