Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 SLC25A39P2-201ENST00000537614 270 ntBASIC10.92□□□□□ -0.66
SMKR1H3BMG3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 RARRES2P9-201ENST00000565168 469 ntBASIC10.92□□□□□ -0.66
SMKR1H3BMG3 AC105021.1-202ENST00000570572 669 ntBASIC10.92□□□□□ -0.66
SMKR1H3BMG3 SAMD11P1-201ENST00000571429 661 ntBASIC10.92□□□□□ -0.66
SMKR1H3BMG3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 FP325330.2-201ENST00000624219 5630 ntBASIC10.92□□□□□ -0.66
SMKR1H3BMG3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 AC020910.6-201ENST00000623084 1459 ntBASIC10.92□□□□□ -0.66
SMKR1H3BMG3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 AC068760.1-201ENST00000493579 1953 ntBASIC10.92□□□□□ -0.66
SMKR1H3BMG3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.92□□□□□ -0.66
SMKR1H3BMG3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 AL360270.3-201ENST00000609118 1348 ntBASIC10.91□□□□□ -0.66
SMKR1H3BMG3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 SPDYE11-202ENST00000450699 704 ntBASIC10.91□□□□□ -0.66
SMKR1H3BMG3 RN7SL589P-201ENST00000481268 310 ntBASIC10.91□□□□□ -0.66
SMKR1H3BMG3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 BANF1P1-201ENST00000553684 263 ntBASIC10.91□□□□□ -0.66
SMKR1H3BMG3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 AC106730.1-201ENST00000566722 1090 ntBASIC10.91□□□□□ -0.66
SMKR1H3BMG3 SPDYE9P-201ENST00000570642 692 ntBASIC10.91□□□□□ -0.66
SMKR1H3BMG3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 SPDYE10P-202ENST00000612005 668 ntBASIC10.91□□□□□ -0.66
SMKR1H3BMG3 SPDYE8P-202ENST00000612377 668 ntBASIC10.91□□□□□ -0.66
SMKR1H3BMG3 AC091812.2-201ENST00000619081 385 ntBASIC10.91□□□□□ -0.66
SMKR1H3BMG3 AC092865.6-201ENST00000642101 219 ntBASIC10.91□□□□□ -0.66
SMKR1H3BMG3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC10.91□□□□□ -0.66
SMKR1H3BMG3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms