Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 AL136172.1-201ENST00000598590 1394 ntBASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 COX20P2-201ENST00000452636 358 ntBASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 AL590640.2-201ENST00000457038 527 ntBASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 FTH1P14-201ENST00000482930 551 ntBASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 FTLP10-202ENST00000505798 471 ntBASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 AL022328.1-201ENST00000610050 478 ntBASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC162PA2VCL2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 AGGF1P1-201ENST00000509500 2073 ntBASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 AC092135.3-201ENST00000624151 1846 ntBASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 AC244669.2-201ENST00000612320 853 ntBASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCDC162PA2VCL2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC162PA2VCL2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms