Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 C8orf49-201ENST00000525043 1968 ntBASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
DDX49Q9Y6V7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
DDX49Q9Y6V7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.96■□□□□ 0.46
DDX49Q9Y6V7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 AC087386.2-201ENST00000623212 4637 ntBASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 AC152010.1-201ENST00000415779 2006 ntBASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 AC234783.1-201ENST00000441761 496 ntBASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 SLC25A47P1-201ENST00000531577 414 ntBASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 BRI3BPP1-201ENST00000594224 787 ntBASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 BTNL10-201ENST00000595971 695 ntBASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 COX11-210ENST00000639671 696 ntBASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDX49Q9Y6V7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 VDAC1P7-201ENST00000462417 847 ntBASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 KRT8P22-201ENST00000562317 1415 ntBASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 AC093525.8-201ENST00000624099 1342 ntBASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX49Q9Y6V7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 246.9 ms