Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 RN7SKP175-201ENST00000408472 289 ntBASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 RPL7P3-201ENST00000441388 714 ntBASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 AC022210.1-201ENST00000449856 793 ntBASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 MIR6805-201ENST00000615055 62 ntBASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 MRPL37P1-201ENST00000592451 1337 ntBASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 AGGF1P1-201ENST00000509500 2073 ntBASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.08□□□□□ -0.16
ATG4BQ9Y4P1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 AL354989.2-201ENST00000435838 1540 ntBASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 MIR658-201ENST00000385210 100 ntBASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 MIR1909-201ENST00000411312 80 ntBASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 BX640514.1-201ENST00000583223 1918 ntBASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 OR2I1P-210ENST00000642037 4691 ntBASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 AC026748.1-201ENST00000624349 3251 ntBASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4BQ9Y4P1 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms