Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 STK16-203ENST00000409516 895 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 AC117503.4-201ENST00000623229 1418 ntBASIC18.54■□□□□ 0.56
SCN11AQ9UI33 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 AMT-256ENST00000638063 1783 ntTSL 5 BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN11AQ9UI33 FGD5P1-202ENST00000614866 2498 ntBASIC18.54■□□□□ 0.56
SCN11AQ9UI33 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 HPD-204ENST00000543163 1709 ntTSL 5 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 RN7SL788P-201ENST00000460504 316 ntBASIC18.53■□□□□ 0.56
SCN11AQ9UI33 OR5BD1P-201ENST00000532527 817 ntBASIC18.53■□□□□ 0.56
SCN11AQ9UI33 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 RN7SL832P-201ENST00000607781 1756 ntBASIC18.53■□□□□ 0.56
SCN11AQ9UI33 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 AC025183.3-201ENST00000623526 1482 ntBASIC18.53■□□□□ 0.56
SCN11AQ9UI33 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 AC108734.2-201ENST00000420887 1069 ntBASIC18.53■□□□□ 0.56
SCN11AQ9UI33 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 AC018638.5-201ENST00000450885 754 ntBASIC18.53■□□□□ 0.56
SCN11AQ9UI33 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN11AQ9UI33 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 LINC00115-201ENST00000473798 1317 ntBASIC18.52■□□□□ 0.56
SCN11AQ9UI33 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN11AQ9UI33 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 BX679664.3-201ENST00000414070 555 ntBASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms