Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 TCAF2P1-201ENST00000291129 2421 ntBASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 HSD3BP1-201ENST00000286193 1111 ntBASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 TUBB8P9-201ENST00000422534 1276 ntBASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 TUBB8P10-201ENST00000430210 1279 ntBASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 OR4A49P-201ENST00000527050 632 ntBASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 AL031577.1-201ENST00000339867 399 ntBASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 ATP5G1P7-201ENST00000444398 400 ntBASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 RN7SL479P-201ENST00000472003 300 ntBASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 MAX-218ENST00000557746 571 ntTSL 4 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 AC009812.1-201ENST00000605948 1059 ntBASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC22.46■■□□□ 1.19
RIMBP3Q9UFD9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RIMBP3Q9UFD9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RIMBP3Q9UFD9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC22.45■■□□□ 1.19
RIMBP3Q9UFD9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 TPM3P7-201ENST00000338274 732 ntBASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 AC091905.3-201ENST00000624959 234 ntBASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC22.45■■□□□ 1.18
RIMBP3Q9UFD9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 DLX4-206ENST00000611342 1662 ntBASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 AP000845.1-201ENST00000581677 2131 ntBASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 MIR1249-201ENST00000408671 66 ntBASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 OR7E155P-201ENST00000412208 1014 ntBASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RIMBP3Q9UFD9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms