Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 AC144831.1-201ENST00000573312 2656 ntBASIC13.65□□□□□ -0.22
LRFN1Q9P244 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 AC010141.1-201ENST00000411585 623 ntBASIC13.65□□□□□ -0.22
LRFN1Q9P244 SLC25A24P2-201ENST00000415059 510 ntBASIC13.65□□□□□ -0.22
LRFN1Q9P244 AC005077.2-201ENST00000449786 690 ntBASIC13.65□□□□□ -0.22
LRFN1Q9P244 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 DUX4L46-201ENST00000566845 751 ntBASIC13.65□□□□□ -0.22
LRFN1Q9P244 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 NDUFV2P1-201ENST00000596415 907 ntBASIC13.65□□□□□ -0.22
LRFN1Q9P244 AC008825.2-201ENST00000603374 718 ntBASIC13.65□□□□□ -0.22
LRFN1Q9P244 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 AL162426.1-201ENST00000624141 743 ntBASIC13.65□□□□□ -0.22
LRFN1Q9P244 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRFN1Q9P244 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
LRFN1Q9P244 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
LRFN1Q9P244 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.64□□□□□ -0.23
LRFN1Q9P244 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 HIST2H2BC-201ENST00000498492 580 ntBASIC13.64□□□□□ -0.23
LRFN1Q9P244 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.64□□□□□ -0.23
LRFN1Q9P244 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 RN7SL163P-201ENST00000583100 276 ntBASIC13.64□□□□□ -0.23
LRFN1Q9P244 AC009955.4-201ENST00000597192 544 ntBASIC13.64□□□□□ -0.23
LRFN1Q9P244 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms