Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 AC138466.3-201ENST00000619983 221 ntBASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 INE2-201ENST00000630399 1874 ntBASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 AL161772.1-201ENST00000610494 4412 ntBASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 AC145098.2-201ENST00000623593 3026 ntBASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AC003102.2-201ENST00000589195 1469 ntBASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 HCG24-202ENST00000414398 717 ntTSL 3 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 GOLGA2P4-201ENST00000441462 777 ntBASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 MESTP3-201ENST00000503460 968 ntBASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AL391280.1-201ENST00000506969 1062 ntBASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AC011840.2-201ENST00000563063 1520 ntBASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 SALL4P5-201ENST00000419001 1760 ntBASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 AC020910.5-201ENST00000623668 1865 ntBASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CUEDC1Q9NWM3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms