Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 RPS2P32-201ENST00000439199 892 ntBASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 TMEM198B-204ENST00000484016 896 ntBASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 KRT8P24-201ENST00000560290 1559 ntBASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXP3Q9BZS1 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.39■□□□□ 0.06
FOXP3Q9BZS1 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 NUS1P3-201ENST00000423502 862 ntBASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 AC106886.1-201ENST00000568660 600 ntBASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXP3Q9BZS1 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 AC022210.1-201ENST00000449856 793 ntBASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
FOXP3Q9BZS1 AL512343.1-201ENST00000605837 169 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms