Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PACSIN1Q9BY11 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PACSIN1Q9BY11 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 AL359881.3-201ENST00000602640 1721 ntBASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 ACTBP8-201ENST00000403258 1108 ntBASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 MYCLP2-201ENST00000449268 967 ntBASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 AL132655.2-201ENST00000596276 594 ntBASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 AL138725.1-201ENST00000407347 1314 ntBASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 AC015688.4-201ENST00000580780 1647 ntBASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 OR2I1P-209ENST00000641730 5365 ntBASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PACSIN1Q9BY11 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 DFFBP1-201ENST00000433250 979 ntBASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 ELK1P1-201ENST00000485699 580 ntBASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 AP005019.2-201ENST00000615104 511 ntBASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PACSIN1Q9BY11 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PACSIN1Q9BY11 AC130686.1-201ENST00000622936 2466 ntBASIC15.8■□□□□ 0.12
PACSIN1Q9BY11 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PACSIN1Q9BY11 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.8■□□□□ 0.12
PACSIN1Q9BY11 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
PACSIN1Q9BY11 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.8■□□□□ 0.12
PACSIN1Q9BY11 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PACSIN1Q9BY11 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms