Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PTPN18Q99952 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PTPN18Q99952 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PTPN18Q99952 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PTPN18Q99952 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN18Q99952 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PTPN18Q99952 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.66■□□□□ 0.26
PTPN18Q99952 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PTPN18Q99952 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN18Q99952 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PTPN18Q99952 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 RNVU1-8-201ENST00000364272 125 ntBASIC16.66■□□□□ 0.26
PTPN18Q99952 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN18Q99952 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN18Q99952 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN18Q99952 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN18Q99952 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN18Q99952 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PTPN18Q99952 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN18Q99952 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.66■□□□□ 0.26
PTPN18Q99952 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 AC026470.1-201ENST00000478038 846 ntBASIC16.66■□□□□ 0.26
PTPN18Q99952 RN7SL564P-201ENST00000496309 250 ntBASIC16.66■□□□□ 0.26
PTPN18Q99952 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.66■□□□□ 0.26
PTPN18Q99952 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN18Q99952 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.66■□□□□ 0.26
PTPN18Q99952 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN18Q99952 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.66■□□□□ 0.26
PTPN18Q99952 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN18Q99952 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN18Q99952 AL133467.4-201ENST00000602953 725 ntBASIC16.66■□□□□ 0.26
PTPN18Q99952 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.66■□□□□ 0.26
PTPN18Q99952 AL591471.1-201ENST00000621855 229 ntBASIC16.66■□□□□ 0.26
PTPN18Q99952 AL591122.2-201ENST00000624125 1853 ntBASIC16.66■□□□□ 0.26
PTPN18Q99952 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.66■□□□□ 0.26
PTPN18Q99952 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTPN18Q99952 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN18Q99952 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN18Q99952 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTPN18Q99952 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PTPN18Q99952 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN18Q99952 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN18Q99952 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PTPN18Q99952 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN18Q99952 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
PTPN18Q99952 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN18Q99952 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN18Q99952 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN18Q99952 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN18Q99952 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN18Q99952 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN18Q99952 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
PTPN18Q99952 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN18Q99952 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN18Q99952 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
PTPN18Q99952 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
PTPN18Q99952 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PTPN18Q99952 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN18Q99952 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN18Q99952 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN18Q99952 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN18Q99952 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN18Q99952 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN18Q99952 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.65■□□□□ 0.26
PTPN18Q99952 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN18Q99952 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN18Q99952 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN18Q99952 AC010976.2-201ENST00000609697 852 ntBASIC16.65■□□□□ 0.26
PTPN18Q99952 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN18Q99952 AC004554.1-201ENST00000422830 1468 ntBASIC16.65■□□□□ 0.26
PTPN18Q99952 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN18Q99952 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN18Q99952 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms