Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 AC140878.1-201ENST00000565277 250 ntBASIC14.19□□□□□ -0.14
CGREF1Q99674 DUX4L47-201ENST00000566374 394 ntBASIC14.19□□□□□ -0.14
CGREF1Q99674 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.19□□□□□ -0.14
CGREF1Q99674 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.19□□□□□ -0.14
CGREF1Q99674 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.19□□□□□ -0.14
CGREF1Q99674 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
CGREF1Q99674 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 RN7SL832P-201ENST00000607781 1756 ntBASIC14.19□□□□□ -0.14
CGREF1Q99674 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CGREF1Q99674 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CGREF1Q99674 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CGREF1Q99674 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CGREF1Q99674 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.18□□□□□ -0.14
CGREF1Q99674 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CGREF1Q99674 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.18□□□□□ -0.14
CGREF1Q99674 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.18□□□□□ -0.14
CGREF1Q99674 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.18□□□□□ -0.14
CGREF1Q99674 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CGREF1Q99674 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.18□□□□□ -0.14
CGREF1Q99674 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.18□□□□□ -0.14
CGREF1Q99674 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.18□□□□□ -0.14
CGREF1Q99674 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.18□□□□□ -0.14
CGREF1Q99674 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.18□□□□□ -0.14
CGREF1Q99674 AL589987.1-201ENST00000453380 819 ntBASIC14.18□□□□□ -0.14
CGREF1Q99674 TMEM198B-204ENST00000484016 896 ntBASIC14.18□□□□□ -0.14
CGREF1Q99674 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CGREF1Q99674 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.18□□□□□ -0.14
CGREF1Q99674 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.18□□□□□ -0.14
CGREF1Q99674 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.18□□□□□ -0.14
CGREF1Q99674 PRSS30P-206ENST00000641773 873 ntBASIC14.18□□□□□ -0.14
CGREF1Q99674 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CGREF1Q99674 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CGREF1Q99674 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CGREF1Q99674 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CGREF1Q99674 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 BTBD7P1-201ENST00000447253 1453 ntBASIC14.18□□□□□ -0.14
CGREF1Q99674 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CGREF1Q99674 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CGREF1Q99674 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
CGREF1Q99674 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CGREF1Q99674 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CGREF1Q99674 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CGREF1Q99674 AC100757.3-201ENST00000622361 1406 ntBASIC14.17□□□□□ -0.14
CGREF1Q99674 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CGREF1Q99674 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CGREF1Q99674 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.17□□□□□ -0.14
CGREF1Q99674 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CGREF1Q99674 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CGREF1Q99674 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.17□□□□□ -0.14
CGREF1Q99674 MYADML-201ENST00000474610 2147 ntBASIC14.17□□□□□ -0.14
CGREF1Q99674 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CGREF1Q99674 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.17□□□□□ -0.14
CGREF1Q99674 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.17□□□□□ -0.14
CGREF1Q99674 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CGREF1Q99674 AC130686.1-201ENST00000622936 2466 ntBASIC14.17□□□□□ -0.14
CGREF1Q99674 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CGREF1Q99674 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CGREF1Q99674 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CGREF1Q99674 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CGREF1Q99674 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CGREF1Q99674 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CGREF1Q99674 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CGREF1Q99674 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CGREF1Q99674 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms