Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL13Q99616 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
CCL13Q99616 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCL13Q99616 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL13Q99616 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 RN7SKP230-201ENST00000365642 335 ntBASIC12.48□□□□□ -0.41
CCL13Q99616 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL13Q99616 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL13Q99616 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 TLE1P1-201ENST00000422965 589 ntBASIC12.48□□□□□ -0.41
CCL13Q99616 HLA-V-201ENST00000429037 534 ntBASIC12.48□□□□□ -0.41
CCL13Q99616 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL13Q99616 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.48□□□□□ -0.41
CCL13Q99616 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.48□□□□□ -0.41
CCL13Q99616 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.48□□□□□ -0.41
CCL13Q99616 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL13Q99616 AC079316.1-201ENST00000548397 411 ntBASIC12.48□□□□□ -0.41
CCL13Q99616 AC023310.1-201ENST00000554836 735 ntBASIC12.48□□□□□ -0.41
CCL13Q99616 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL13Q99616 AP005482.1-201ENST00000563722 1273 ntBASIC12.48□□□□□ -0.41
CCL13Q99616 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.48□□□□□ -0.41
CCL13Q99616 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.48□□□□□ -0.41
CCL13Q99616 MIR4259-201ENST00000584466 101 ntBASIC12.48□□□□□ -0.41
CCL13Q99616 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.48□□□□□ -0.41
CCL13Q99616 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 AC138696.2-201ENST00000607376 223 ntBASIC12.48□□□□□ -0.41
CCL13Q99616 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.48□□□□□ -0.41
CCL13Q99616 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL13Q99616 COX11-210ENST00000639671 696 ntBASIC12.48□□□□□ -0.41
CCL13Q99616 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL13Q99616 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CCL13Q99616 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CCL13Q99616 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL13Q99616 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL13Q99616 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
CCL13Q99616 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL13Q99616 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CCL13Q99616 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CCL13Q99616 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CCL13Q99616 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CCL13Q99616 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL13Q99616 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL13Q99616 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
CCL13Q99616 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL13Q99616 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CCL13Q99616 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.47□□□□□ -0.41
CCL13Q99616 AC099336.1-201ENST00000417053 1171 ntBASIC12.47□□□□□ -0.41
CCL13Q99616 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CCL13Q99616 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CCL13Q99616 CSF2RBP1-201ENST00000447905 391 ntBASIC12.47□□□□□ -0.41
CCL13Q99616 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.47□□□□□ -0.41
CCL13Q99616 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.47□□□□□ -0.41
CCL13Q99616 AC119751.2-201ENST00000504529 210 ntBASIC12.47□□□□□ -0.41
CCL13Q99616 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.47□□□□□ -0.41
CCL13Q99616 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.47□□□□□ -0.41
CCL13Q99616 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.47□□□□□ -0.41
CCL13Q99616 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.47□□□□□ -0.41
CCL13Q99616 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL13Q99616 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.47□□□□□ -0.41
CCL13Q99616 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL13Q99616 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CCL13Q99616 AC068418.2-201ENST00000577309 3703 ntBASIC12.47□□□□□ -0.41
CCL13Q99616 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms