Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 AC015688.4-201ENST00000580780 1647 ntBASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 AC140658.4-201ENST00000561990 352 ntBASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 AC140113.1-201ENST00000603467 169 ntBASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 FO393412.1-201ENST00000619841 382 ntBASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 AC009145.4-201ENST00000625119 1294 ntBASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.84■□□□□ 0.45
CRAMP1Q96RY5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CRAMP1Q96RY5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CRAMP1Q96RY5 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CRAMP1Q96RY5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CRAMP1Q96RY5 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CRAMP1Q96RY5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CRAMP1Q96RY5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CRAMP1Q96RY5 AC006372.4-201ENST00000624122 1543 ntBASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 TEKT4P2-202ENST00000559466 1312 ntBASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 AREG-202ENST00000502307 956 ntTSL 5 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 AC068867.1-201ENST00000559855 150 ntBASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 AC021016.3-201ENST00000608367 477 ntBASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC17.82■□□□□ 0.44
CRAMP1Q96RY5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms