Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 AC091271.1-201ENST00000611877 1162 ntBASIC17.71■□□□□ 0.43
DDX11Q96FC9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.71■□□□□ 0.43
DDX11Q96FC9 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.71■□□□□ 0.42
DDX11Q96FC9 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DDX11Q96FC9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.71■□□□□ 0.42
DDX11Q96FC9 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DDX11Q96FC9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
DDX11Q96FC9 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DDX11Q96FC9 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
DDX11Q96FC9 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
DDX11Q96FC9 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX11Q96FC9 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX11Q96FC9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX11Q96FC9 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DDX11Q96FC9 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 FAM197Y7-201ENST00000432892 766 ntBASIC17.7■□□□□ 0.42
DDX11Q96FC9 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.7■□□□□ 0.42
DDX11Q96FC9 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.7■□□□□ 0.42
DDX11Q96FC9 AC244093.1-201ENST00000610837 814 ntBASIC17.7■□□□□ 0.42
DDX11Q96FC9 AC132938.4-201ENST00000623835 848 ntBASIC17.7■□□□□ 0.42
DDX11Q96FC9 AC023090.2-201ENST00000625182 2110 ntBASIC17.7■□□□□ 0.42
DDX11Q96FC9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 LINC01230-201ENST00000625222 3017 ntBASIC17.7■□□□□ 0.42
DDX11Q96FC9 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
DDX11Q96FC9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DDX11Q96FC9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX11Q96FC9 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX11Q96FC9 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX11Q96FC9 AC005089.1-201ENST00000619486 2241 ntBASIC17.7■□□□□ 0.42
DDX11Q96FC9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 AP001267.2-201ENST00000532619 2086 ntBASIC17.69■□□□□ 0.42
DDX11Q96FC9 AC006001.1-201ENST00000325130 474 ntBASIC17.69■□□□□ 0.42
DDX11Q96FC9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 AC078819.1-201ENST00000547454 765 ntBASIC17.69■□□□□ 0.42
DDX11Q96FC9 AC012085.1-201ENST00000548270 765 ntBASIC17.69■□□□□ 0.42
DDX11Q96FC9 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 AC103810.3-201ENST00000583567 96 ntBASIC17.69■□□□□ 0.42
DDX11Q96FC9 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 AC138951.2-201ENST00000623455 1161 ntBASIC17.69■□□□□ 0.42
DDX11Q96FC9 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms