Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 CLUHP2-201ENST00000426660 1303 ntBASIC15.73■□□□□ 0.11
TRIM11Q96F44 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 POM121L8P-201ENST00000417732 1281 ntBASIC15.73■□□□□ 0.11
TRIM11Q96F44 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 POM121L9P-203ENST00000441984 1285 ntBASIC15.73■□□□□ 0.11
TRIM11Q96F44 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 FTLP10-202ENST00000505798 471 ntBASIC15.73■□□□□ 0.11
TRIM11Q96F44 AC068587.3-201ENST00000526613 355 ntBASIC15.73■□□□□ 0.11
TRIM11Q96F44 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 MIR5189-201ENST00000577370 114 ntBASIC15.73■□□□□ 0.11
TRIM11Q96F44 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 AC138466.3-201ENST00000619983 221 ntBASIC15.73■□□□□ 0.11
TRIM11Q96F44 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.73■□□□□ 0.11
TRIM11Q96F44 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
TRIM11Q96F44 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 ALG3P1-201ENST00000508806 1114 ntBASIC15.72■□□□□ 0.11
TRIM11Q96F44 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 TDH-203ENST00000531764 1110 ntBASIC15.72■□□□□ 0.11
TRIM11Q96F44 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 AC015688.4-201ENST00000580780 1647 ntBASIC15.72■□□□□ 0.11
TRIM11Q96F44 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM11Q96F44 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM11Q96F44 AC138969.2-201ENST00000532739 9932 ntBASIC15.71■□□□□ 0.11
TRIM11Q96F44 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms