Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 AC138696.2-201ENST00000607376 223 ntBASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 ENPP7P14-201ENST00000621765 1040 ntBASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 CLUHP2-201ENST00000426660 1303 ntBASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCC2Q8TAQ2 AC092135.3-201ENST00000624151 1846 ntBASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 AC006001.1-201ENST00000325130 474 ntBASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCC2Q8TAQ2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms