Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AC073548.1-201ENST00000624088 1882 ntBASIC12.93□□□□□ -0.34
BEST4Q8NFU0 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AC023794.5-201ENST00000564380 2157 ntBASIC12.93□□□□□ -0.34
BEST4Q8NFU0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 IL9RP2-201ENST00000423948 1312 ntBASIC12.92□□□□□ -0.34
BEST4Q8NFU0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 TMEM198B-204ENST00000484016 896 ntBASIC12.92□□□□□ -0.34
BEST4Q8NFU0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 BANF1P1-201ENST00000553684 263 ntBASIC12.92□□□□□ -0.34
BEST4Q8NFU0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 FAM197Y3-203ENST00000618346 717 ntBASIC12.92□□□□□ -0.34
BEST4Q8NFU0 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.92□□□□□ -0.34
BEST4Q8NFU0 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.92□□□□□ -0.34
BEST4Q8NFU0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 PCDHB18P-202ENST00000526308 3197 ntBASIC12.91□□□□□ -0.34
BEST4Q8NFU0 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 AC104457.1-201ENST00000401024 814 ntBASIC12.91□□□□□ -0.34
BEST4Q8NFU0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms