Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 CICP8-201ENST00000455800 2813 ntBASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SIMC1Q8NDZ2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.08□□□□□ -0.15
SIMC1Q8NDZ2 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SIMC1Q8NDZ2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.08□□□□□ -0.15
SIMC1Q8NDZ2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.08□□□□□ -0.15
SIMC1Q8NDZ2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SIMC1Q8NDZ2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SIMC1Q8NDZ2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 AC007389.4-201ENST00000454674 793 ntBASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 GIMAP3P-201ENST00000495150 836 ntBASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 KRT18P25-201ENST00000508931 1278 ntBASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 TCAF1P1-201ENST00000414990 2232 ntBASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.08□□□□□ -0.16
SIMC1Q8NDZ2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 MBLAC2-202ENST00000514906 1936 ntBASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms