Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 HTR5BP-201ENST00000430851 1154 ntBASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NANOGP1Q8N7R0 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 AC004832.2-201ENST00000426397 482 ntBASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 AL512361.1-201ENST00000554200 418 ntBASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 AC040169.1-201ENST00000565382 521 ntBASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 AL109936.8-201ENST00000641772 604 ntBASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NANOGP1Q8N7R0 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms