Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 CHMP1AP1-201ENST00000445563 662 ntBASIC14.28□□□□□ -0.12
RNF44Q7L0R7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 KRT8P4-201ENST00000509735 1454 ntBASIC14.28□□□□□ -0.12
RNF44Q7L0R7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 MIR4741-201ENST00000579822 90 ntBASIC14.28□□□□□ -0.12
RNF44Q7L0R7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 AC009093.2-202ENST00000620513 2079 ntBASIC14.28□□□□□ -0.12
RNF44Q7L0R7 LINC01101-201ENST00000622953 1884 ntBASIC14.28□□□□□ -0.12
RNF44Q7L0R7 AC020910.5-201ENST00000623668 1865 ntBASIC14.28□□□□□ -0.12
RNF44Q7L0R7 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF44Q7L0R7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 AL023775.1-201ENST00000454907 1746 ntBASIC14.27□□□□□ -0.12
RNF44Q7L0R7 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RNF44Q7L0R7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 AC079178.1-201ENST00000420915 656 ntBASIC14.27□□□□□ -0.13
RNF44Q7L0R7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 HIST2H2BB-201ENST00000449108 381 ntBASIC14.27□□□□□ -0.13
RNF44Q7L0R7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 ALG3P1-201ENST00000508806 1114 ntBASIC14.27□□□□□ -0.13
RNF44Q7L0R7 GCOM2-201ENST00000509133 1104 ntBASIC14.27□□□□□ -0.13
RNF44Q7L0R7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 FAM86HP-204ENST00000513466 959 ntBASIC14.27□□□□□ -0.13
RNF44Q7L0R7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 RN7SL560P-201ENST00000577943 264 ntBASIC14.27□□□□□ -0.13
RNF44Q7L0R7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 AC002472.3-201ENST00000640124 621 ntBASIC14.27□□□□□ -0.13
RNF44Q7L0R7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 LINC02228-204ENST00000642115 2962 ntBASIC14.27□□□□□ -0.13
RNF44Q7L0R7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF44Q7L0R7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF44Q7L0R7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms