Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 KRT18P64-201ENST00000434946 1219 ntBASIC13.84□□□□□ -0.19
TUBA1AQ71U36 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 TPT1P11-201ENST00000458482 498 ntBASIC13.84□□□□□ -0.19
TUBA1AQ71U36 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 AC097359.3-201ENST00000603982 1210 ntBASIC13.84□□□□□ -0.19
TUBA1AQ71U36 AC074044.1-201ENST00000609673 707 ntBASIC13.84□□□□□ -0.19
TUBA1AQ71U36 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
TUBA1AQ71U36 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
TUBA1AQ71U36 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
TUBA1AQ71U36 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
TUBA1AQ71U36 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TUBA1AQ71U36 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TUBA1AQ71U36 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TUBA1AQ71U36 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1AQ71U36 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms