Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 AL512384.1-201ENST00000406683 331 ntBASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 CHCHD2P3-201ENST00000603038 451 ntBASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 AL133215.2-201ENST00000609242 977 ntBASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 AC018442.1-201ENST00000421439 2061 ntBASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
FOXR1Q6PIV2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 AMT-221ENST00000538581 2038 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 AC245100.5-201ENST00000452108 331 ntBASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXR1Q6PIV2 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms