Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 AC103988.2-201ENST00000561804 725 ntBASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 MIR3907-201ENST00000579424 151 ntBASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 AL133499.1-201ENST00000596207 608 ntBASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 AC009884.2-201ENST00000603110 324 ntBASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC62Q6P9F0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 ZBED1P1-201ENST00000502364 1930 ntBASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 AC013726.1-201ENST00000563747 2285 ntBASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 AL645933.1-201ENST00000440087 609 ntBASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 RCC2P8-201ENST00000502779 1035 ntBASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 AL136379.1-201ENST00000623471 2642 ntBASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC62Q6P9F0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms