Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.28■□□□□ 0.04
ALFQ53S48 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.28■□□□□ 0.04
ALFQ53S48 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ALFQ53S48 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALFQ53S48 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
ALFQ53S48 AC023824.1-201ENST00000562945 2975 ntBASIC15.27■□□□□ 0.04
ALFQ53S48 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALFQ53S48 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.27■□□□□ 0.04
ALFQ53S48 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
ALFQ53S48 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALFQ53S48 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALFQ53S48 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ALFQ53S48 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ALFQ53S48 AL136172.1-201ENST00000598590 1394 ntBASIC15.27■□□□□ 0.04
ALFQ53S48 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALFQ53S48 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
ALFQ53S48 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
ALFQ53S48 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
ALFQ53S48 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALFQ53S48 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALFQ53S48 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.27■□□□□ 0.04
ALFQ53S48 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALFQ53S48 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ALFQ53S48 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ALFQ53S48 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALFQ53S48 MTX1P1-201ENST00000440904 838 ntBASIC15.27■□□□□ 0.04
ALFQ53S48 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ALFQ53S48 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.27■□□□□ 0.04
ALFQ53S48 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.27■□□□□ 0.04
ALFQ53S48 AL136301.1-201ENST00000615830 422 ntBASIC15.27■□□□□ 0.04
ALFQ53S48 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ALFQ53S48 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALFQ53S48 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
ALFQ53S48 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ALFQ53S48 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
ALFQ53S48 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ALFQ53S48 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ALFQ53S48 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ALFQ53S48 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.27■□□□□ 0.03
ALFQ53S48 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.27■□□□□ 0.03
ALFQ53S48 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ALFQ53S48 AL136379.1-201ENST00000623471 2642 ntBASIC15.27■□□□□ 0.03
ALFQ53S48 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
ALFQ53S48 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.27■□□□□ 0.03
ALFQ53S48 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ALFQ53S48 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.26■□□□□ 0.03
ALFQ53S48 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.26■□□□□ 0.03
ALFQ53S48 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.26■□□□□ 0.03
ALFQ53S48 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.26■□□□□ 0.03
ALFQ53S48 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.26■□□□□ 0.03
ALFQ53S48 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ALFQ53S48 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.26■□□□□ 0.03
ALFQ53S48 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 MRPL37P1-201ENST00000592451 1337 ntBASIC15.26■□□□□ 0.03
ALFQ53S48 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ALFQ53S48 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ALFQ53S48 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ALFQ53S48 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.26■□□□□ 0.03
ALFQ53S48 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 AC079178.1-201ENST00000420915 656 ntBASIC15.26■□□□□ 0.03
ALFQ53S48 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.26■□□□□ 0.03
ALFQ53S48 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ALFQ53S48 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.26■□□□□ 0.03
ALFQ53S48 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.26■□□□□ 0.03
ALFQ53S48 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.26■□□□□ 0.03
ALFQ53S48 ALG3P1-201ENST00000508806 1114 ntBASIC15.26■□□□□ 0.03
ALFQ53S48 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.26■□□□□ 0.03
ALFQ53S48 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.26■□□□□ 0.03
ALFQ53S48 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.26■□□□□ 0.03
ALFQ53S48 MIR4783-201ENST00000580343 82 ntBASIC15.26■□□□□ 0.03
ALFQ53S48 AL096828.3-201ENST00000615354 462 ntBASIC15.26■□□□□ 0.03
ALFQ53S48 AC244157.2-201ENST00000616239 1006 ntBASIC15.26■□□□□ 0.03
ALFQ53S48 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.26■□□□□ 0.03
ALFQ53S48 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ALFQ53S48 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ALFQ53S48 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 AC092135.3-201ENST00000624151 1846 ntBASIC15.26■□□□□ 0.03
ALFQ53S48 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.26■□□□□ 0.03
ALFQ53S48 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
ALFQ53S48 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ALFQ53S48 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.26■□□□□ 0.03
ALFQ53S48 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
ALFQ53S48 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ALFQ53S48 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALFQ53S48 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ALFQ53S48 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ALFQ53S48 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ALFQ53S48 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 231.5 ms