Protein–RNA interactions for Protein: Q495N2

SLC36A3, Proton-coupled amino acid transporter 3, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC36A3Q495N2 AC090643.2-201ENST00000623442 2029 ntBASIC13.9□□□□□ -0.18
SLC36A3Q495N2 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.9□□□□□ -0.18
SLC36A3Q495N2 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SLC36A3Q495N2 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 AC092865.5-201ENST00000545435 363 ntBASIC13.89□□□□□ -0.19
SLC36A3Q495N2 AL512356.2-201ENST00000546955 174 ntBASIC13.89□□□□□ -0.19
SLC36A3Q495N2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 LINC01115-203ENST00000606068 577 ntBASIC13.89□□□□□ -0.19
SLC36A3Q495N2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SLC36A3Q495N2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 CNN2P11-201ENST00000429351 262 ntBASIC13.88□□□□□ -0.19
SLC36A3Q495N2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 SNHG9-202ENST00000564014 471 ntBASIC13.88□□□□□ -0.19
SLC36A3Q495N2 SAMD11P1-201ENST00000571429 661 ntBASIC13.88□□□□□ -0.19
SLC36A3Q495N2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC36A3Q495N2 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms