Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 AC005324.6-201ENST00000587972 613 ntBASIC19.21■□□□□ 0.67
CCDC27Q2M243 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 TKT-201ENST00000296289 1931 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 HSPA7-201ENST00000445535 1927 ntBASIC19.21■□□□□ 0.67
CCDC27Q2M243 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 AC104506.1-201ENST00000609247 429 ntBASIC19.2■□□□□ 0.66
CCDC27Q2M243 AL096828.3-201ENST00000615354 462 ntBASIC19.2■□□□□ 0.66
CCDC27Q2M243 AL033527.4-201ENST00000641026 673 ntBASIC19.2■□□□□ 0.66
CCDC27Q2M243 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 AC064801.2-201ENST00000625052 1303 ntBASIC19.2■□□□□ 0.66
CCDC27Q2M243 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC27Q2M243 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC27Q2M243 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 AL161932.2-201ENST00000435436 679 ntBASIC19.19■□□□□ 0.66
CCDC27Q2M243 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 IGHVIII-5-2-201ENST00000522505 261 ntBASIC19.19■□□□□ 0.66
CCDC27Q2M243 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 AP000346.4-201ENST00000614827 381 ntBASIC19.19■□□□□ 0.66
CCDC27Q2M243 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC27Q2M243 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms