Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC211476.1-201ENST00000503899 468 ntBASIC13.34□□□□□ -0.27
SCN1BQ07699 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.34□□□□□ -0.27
SCN1BQ07699 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.34□□□□□ -0.27
SCN1BQ07699 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SCN1BQ07699 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
SCN1BQ07699 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SCN1BQ07699 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.34□□□□□ -0.27
SCN1BQ07699 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCN1BQ07699 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCN1BQ07699 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SCN1BQ07699 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SCN1BQ07699 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCN1BQ07699 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.34□□□□□ -0.27
SCN1BQ07699 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCN1BQ07699 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCN1BQ07699 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCN1BQ07699 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SCN1BQ07699 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SCN1BQ07699 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.33□□□□□ -0.27
SCN1BQ07699 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SCN1BQ07699 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
SCN1BQ07699 AC004241.5-201ENST00000623870 2448 ntBASIC13.33□□□□□ -0.27
SCN1BQ07699 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.33□□□□□ -0.27
SCN1BQ07699 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
SCN1BQ07699 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.33□□□□□ -0.28
SCN1BQ07699 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SCN1BQ07699 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SCN1BQ07699 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SCN1BQ07699 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.33□□□□□ -0.28
SCN1BQ07699 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
SCN1BQ07699 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.33□□□□□ -0.28
SCN1BQ07699 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
SCN1BQ07699 RPSAP43-201ENST00000402237 625 ntBASIC13.33□□□□□ -0.28
SCN1BQ07699 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SCN1BQ07699 UPF3AP3-201ENST00000420996 769 ntBASIC13.33□□□□□ -0.28
SCN1BQ07699 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.33□□□□□ -0.28
SCN1BQ07699 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.33□□□□□ -0.28
SCN1BQ07699 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.33□□□□□ -0.28
SCN1BQ07699 AC093520.2-201ENST00000561830 333 ntBASIC13.33□□□□□ -0.28
SCN1BQ07699 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.33□□□□□ -0.28
SCN1BQ07699 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.33□□□□□ -0.28
SCN1BQ07699 MIR6080-201ENST00000617359 66 ntBASIC13.33□□□□□ -0.28
SCN1BQ07699 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.33□□□□□ -0.28
SCN1BQ07699 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.33□□□□□ -0.28
SCN1BQ07699 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.33□□□□□ -0.28
SCN1BQ07699 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.33□□□□□ -0.28
SCN1BQ07699 INE2-201ENST00000630399 1874 ntBASIC13.33□□□□□ -0.28
SCN1BQ07699 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SCN1BQ07699 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.33□□□□□ -0.28
SCN1BQ07699 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCN1BQ07699 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.32□□□□□ -0.28
SCN1BQ07699 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN1BQ07699 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SCN1BQ07699 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SCN1BQ07699 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN1BQ07699 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SCN1BQ07699 BEND3P3-201ENST00000611030 2440 ntBASIC13.32□□□□□ -0.28
SCN1BQ07699 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN1BQ07699 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SCN1BQ07699 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN1BQ07699 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SCN1BQ07699 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN1BQ07699 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.32□□□□□ -0.28
SCN1BQ07699 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.32□□□□□ -0.28
SCN1BQ07699 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN1BQ07699 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.32□□□□□ -0.28
SCN1BQ07699 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.32□□□□□ -0.28
SCN1BQ07699 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.32□□□□□ -0.28
SCN1BQ07699 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.32□□□□□ -0.28
SCN1BQ07699 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.32□□□□□ -0.28
SCN1BQ07699 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.32□□□□□ -0.28
SCN1BQ07699 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.32□□□□□ -0.28
SCN1BQ07699 YBX1P5-201ENST00000509441 847 ntBASIC13.32□□□□□ -0.28
SCN1BQ07699 AP000344.2-201ENST00000512987 629 ntBASIC13.32□□□□□ -0.28
SCN1BQ07699 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.32□□□□□ -0.28
SCN1BQ07699 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.32□□□□□ -0.28
SCN1BQ07699 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SCN1BQ07699 AC026150.2-201ENST00000564693 1156 ntBASIC13.32□□□□□ -0.28
SCN1BQ07699 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.32□□□□□ -0.28
SCN1BQ07699 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.32□□□□□ -0.28
SCN1BQ07699 MIR4453-201ENST00000584019 89 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms