Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRNB3Q05901 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRNB3Q05901 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 INE2-201ENST00000630399 1874 ntBASIC14.16□□□□□ -0.14
CHRNB3Q05901 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 MIR943-201ENST00000401286 94 ntBASIC14.16□□□□□ -0.14
CHRNB3Q05901 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 AC093214.1-201ENST00000511688 1107 ntBASIC14.16□□□□□ -0.14
CHRNB3Q05901 AC140878.1-201ENST00000565277 250 ntBASIC14.16□□□□□ -0.14
CHRNB3Q05901 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 TCAF1P1-201ENST00000414990 2232 ntBASIC14.16□□□□□ -0.14
CHRNB3Q05901 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRNB3Q05901 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CHRNB3Q05901 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 CICP8-201ENST00000455800 2813 ntBASIC14.15□□□□□ -0.14
CHRNB3Q05901 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 AC130686.1-201ENST00000622936 2466 ntBASIC14.15□□□□□ -0.14
CHRNB3Q05901 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 AL731571.1-201ENST00000617058 5428 ntBASIC14.15□□□□□ -0.14
CHRNB3Q05901 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 GPS2P2-201ENST00000430745 888 ntBASIC14.15□□□□□ -0.14
CHRNB3Q05901 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 AC004066.1-201ENST00000502488 802 ntBASIC14.15□□□□□ -0.14
CHRNB3Q05901 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 AC051619.7-201ENST00000568314 623 ntBASIC14.15□□□□□ -0.14
CHRNB3Q05901 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 LINC02084-201ENST00000606069 1096 ntBASIC14.15□□□□□ -0.14
CHRNB3Q05901 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 AF228730.6-201ENST00000641497 218 ntBASIC14.15□□□□□ -0.14
CHRNB3Q05901 AC084121.3-201ENST00000641716 218 ntBASIC14.15□□□□□ -0.14
CHRNB3Q05901 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CHRNB3Q05901 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRNB3Q05901 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms