Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC20.83■□□□□ 0.92
CLTCQ00610 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC20.83■□□□□ 0.92
CLTCQ00610 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
CLTCQ00610 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLTCQ00610 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLTCQ00610 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC20.82■□□□□ 0.92
CLTCQ00610 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLTCQ00610 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CLTCQ00610 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CLTCQ00610 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLTCQ00610 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLTCQ00610 SF1-209ENST00000433274 2317 ntTSL 2 BASIC20.82■□□□□ 0.92
CLTCQ00610 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC20.82■□□□□ 0.92
CLTCQ00610 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC20.82■□□□□ 0.92
CLTCQ00610 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLTCQ00610 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC20.82■□□□□ 0.92
CLTCQ00610 AC113347.2-201ENST00000512350 279 ntBASIC20.82■□□□□ 0.92
CLTCQ00610 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC20.82■□□□□ 0.92
CLTCQ00610 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC20.82■□□□□ 0.92
CLTCQ00610 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC20.82■□□□□ 0.92
CLTCQ00610 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC20.82■□□□□ 0.92
CLTCQ00610 RN7SL455P-201ENST00000580629 282 ntBASIC20.82■□□□□ 0.92
CLTCQ00610 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC20.82■□□□□ 0.92
CLTCQ00610 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC20.82■□□□□ 0.92
CLTCQ00610 AC080013.5-201ENST00000607044 679 ntBASIC20.82■□□□□ 0.92
CLTCQ00610 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLTCQ00610 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLTCQ00610 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.82■□□□□ 0.92
CLTCQ00610 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLTCQ00610 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLTCQ00610 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CLTCQ00610 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLTCQ00610 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.82■□□□□ 0.92
CLTCQ00610 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CLTCQ00610 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC20.82■□□□□ 0.92
CLTCQ00610 LTB4R2-202ENST00000528054 3092 ntBASIC20.81■□□□□ 0.92
CLTCQ00610 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLTCQ00610 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLTCQ00610 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CLTCQ00610 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLTCQ00610 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC20.81■□□□□ 0.92
CLTCQ00610 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC20.81■□□□□ 0.92
CLTCQ00610 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC20.81■□□□□ 0.92
CLTCQ00610 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC20.81■□□□□ 0.92
CLTCQ00610 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC20.81■□□□□ 0.92
CLTCQ00610 AL009176.1-201ENST00000607876 650 ntBASIC20.81■□□□□ 0.92
CLTCQ00610 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC20.81■□□□□ 0.92
CLTCQ00610 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC20.81■□□□□ 0.92
CLTCQ00610 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.81■□□□□ 0.92
CLTCQ00610 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC20.81■□□□□ 0.92
CLTCQ00610 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC20.81■□□□□ 0.92
CLTCQ00610 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTCQ00610 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLTCQ00610 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLTCQ00610 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTCQ00610 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLTCQ00610 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTCQ00610 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CLTCQ00610 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLTCQ00610 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC20.8■□□□□ 0.92
CLTCQ00610 GALP-202ENST00000440823 889 ntTSL 5 BASIC20.8■□□□□ 0.92
CLTCQ00610 KRT18P62-201ENST00000446618 1287 ntBASIC20.8■□□□□ 0.92
CLTCQ00610 SLC25A15P3-201ENST00000505530 290 ntBASIC20.8■□□□□ 0.92
CLTCQ00610 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC20.8■□□□□ 0.92
CLTCQ00610 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC20.8■□□□□ 0.92
CLTCQ00610 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC20.8■□□□□ 0.92
CLTCQ00610 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC20.8■□□□□ 0.92
CLTCQ00610 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC20.8■□□□□ 0.92
CLTCQ00610 AC139713.2-207ENST00000641556 1292 ntBASIC20.8■□□□□ 0.92
CLTCQ00610 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLTCQ00610 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLTCQ00610 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTCQ00610 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTCQ00610 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC20.8■□□□□ 0.92
CLTCQ00610 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC20.8■□□□□ 0.92
CLTCQ00610 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTCQ00610 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
CLTCQ00610 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLTCQ00610 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC20.8■□□□□ 0.92
CLTCQ00610 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTCQ00610 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTCQ00610 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLTCQ00610 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC20.8■□□□□ 0.92
CLTCQ00610 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTCQ00610 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLTCQ00610 FAM21EP-201ENST00000417804 985 ntBASIC20.8■□□□□ 0.92
CLTCQ00610 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLTCQ00610 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms