Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 AC067750.1-201ENST00000608826 6545 ntBASIC13.82□□□□□ -0.2
HOXC5Q00444 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC5Q00444 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC5Q00444 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC5Q00444 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 KLF2P2-201ENST00000416807 1039 ntBASIC13.82□□□□□ -0.2
HOXC5Q00444 SOCS2P1-201ENST00000417727 557 ntBASIC13.82□□□□□ -0.2
HOXC5Q00444 NUS1P3-201ENST00000423502 862 ntBASIC13.82□□□□□ -0.2
HOXC5Q00444 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC5Q00444 AL442647.2-201ENST00000429864 857 ntBASIC13.82□□□□□ -0.2
HOXC5Q00444 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.82□□□□□ -0.2
HOXC5Q00444 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC5Q00444 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HOXC5Q00444 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC5Q00444 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HOXC5Q00444 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.82□□□□□ -0.2
HOXC5Q00444 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
HOXC5Q00444 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.82□□□□□ -0.2
HOXC5Q00444 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.82□□□□□ -0.2
HOXC5Q00444 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.82□□□□□ -0.2
HOXC5Q00444 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 AC099521.3-201ENST00000624251 2938 ntBASIC13.82□□□□□ -0.2
HOXC5Q00444 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HOXC5Q00444 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HOXC5Q00444 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
HOXC5Q00444 HSPA7-201ENST00000445535 1927 ntBASIC13.82□□□□□ -0.2
HOXC5Q00444 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.82□□□□□ -0.2
HOXC5Q00444 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC5Q00444 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC5Q00444 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HOXC5Q00444 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HOXC5Q00444 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
HOXC5Q00444 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HOXC5Q00444 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXC5Q00444 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXC5Q00444 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXC5Q00444 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXC5Q00444 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXC5Q00444 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HOXC5Q00444 ELK1P1-201ENST00000485699 580 ntBASIC13.81□□□□□ -0.2
HOXC5Q00444 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.81□□□□□ -0.2
HOXC5Q00444 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
HOXC5Q00444 DUX4L47-201ENST00000566374 394 ntBASIC13.81□□□□□ -0.2
HOXC5Q00444 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXC5Q00444 CTBP2P3-201ENST00000585629 1255 ntBASIC13.81□□□□□ -0.2
HOXC5Q00444 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 LINC02560-201ENST00000596379 459 ntBASIC13.81□□□□□ -0.2
HOXC5Q00444 AC008494.3-201ENST00000606615 944 ntBASIC13.81□□□□□ -0.2
HOXC5Q00444 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 AJ011932.1-201ENST00000621707 465 ntBASIC13.81□□□□□ -0.2
HOXC5Q00444 AC005252.2-201ENST00000624630 1141 ntBASIC13.81□□□□□ -0.2
HOXC5Q00444 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXC5Q00444 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HOXC5Q00444 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.81□□□□□ -0.2
HOXC5Q00444 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXC5Q00444 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HOXC5Q00444 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXC5Q00444 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC5Q00444 AC015802.1-201ENST00000588104 1449 ntBASIC13.81□□□□□ -0.2
HOXC5Q00444 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXC5Q00444 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
HOXC5Q00444 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC5Q00444 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms