Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.49□□□□□ -0.09
YBX1P67809 RNA5SP486-201ENST00000515961 83 ntBASIC14.49□□□□□ -0.09
YBX1P67809 AP000812.2-201ENST00000538934 718 ntBASIC14.49□□□□□ -0.09
YBX1P67809 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.49□□□□□ -0.09
YBX1P67809 RN7SL48P-201ENST00000579283 293 ntBASIC14.49□□□□□ -0.09
YBX1P67809 AC138951.2-201ENST00000623455 1161 ntBASIC14.49□□□□□ -0.09
YBX1P67809 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
YBX1P67809 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
YBX1P67809 AC009093.2-202ENST00000620513 2079 ntBASIC14.49□□□□□ -0.09
YBX1P67809 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.49□□□□□ -0.09
YBX1P67809 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
YBX1P67809 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.49□□□□□ -0.09
YBX1P67809 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
YBX1P67809 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
YBX1P67809 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
YBX1P67809 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.48□□□□□ -0.09
YBX1P67809 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
YBX1P67809 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 AC006001.1-201ENST00000325130 474 ntBASIC14.48□□□□□ -0.09
YBX1P67809 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 RN7SKP230-201ENST00000365642 335 ntBASIC14.48□□□□□ -0.09
YBX1P67809 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.48□□□□□ -0.09
YBX1P67809 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.48□□□□□ -0.09
YBX1P67809 KLF2P4-201ENST00000451959 1225 ntBASIC14.48□□□□□ -0.09
YBX1P67809 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.48□□□□□ -0.09
YBX1P67809 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.48□□□□□ -0.09
YBX1P67809 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.48□□□□□ -0.09
YBX1P67809 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.48□□□□□ -0.09
YBX1P67809 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
YBX1P67809 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.48□□□□□ -0.09
YBX1P67809 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
YBX1P67809 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.48□□□□□ -0.09
YBX1P67809 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.48□□□□□ -0.09
YBX1P67809 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.48□□□□□ -0.09
YBX1P67809 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.48□□□□□ -0.09
YBX1P67809 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
YBX1P67809 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.47□□□□□ -0.09
YBX1P67809 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.47□□□□□ -0.09
YBX1P67809 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
YBX1P67809 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.47□□□□□ -0.09
YBX1P67809 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
YBX1P67809 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.47□□□□□ -0.09
YBX1P67809 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
YBX1P67809 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.47□□□□□ -0.09
YBX1P67809 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 TPM3P8-201ENST00000330554 643 ntBASIC14.47□□□□□ -0.09
YBX1P67809 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 MIR1202-201ENST00000408529 83 ntBASIC14.47□□□□□ -0.09
YBX1P67809 AC099336.1-201ENST00000417053 1171 ntBASIC14.47□□□□□ -0.09
YBX1P67809 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
YBX1P67809 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.47□□□□□ -0.09
YBX1P67809 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.47□□□□□ -0.09
YBX1P67809 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
YBX1P67809 AC104989.1-201ENST00000519711 778 ntBASIC14.47□□□□□ -0.09
YBX1P67809 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.47□□□□□ -0.09
YBX1P67809 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.47□□□□□ -0.09
YBX1P67809 AC138466.3-201ENST00000619983 221 ntBASIC14.47□□□□□ -0.09
YBX1P67809 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.47□□□□□ -0.09
YBX1P67809 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
YBX1P67809 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
YBX1P67809 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms