Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TMEM198B-204ENST00000484016 896 ntBASIC10.57□□□□□ -0.72
RPL39P62891 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.57□□□□□ -0.72
RPL39P62891 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC10.57□□□□□ -0.72
RPL39P62891 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.57□□□□□ -0.72
RPL39P62891 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.57□□□□□ -0.72
RPL39P62891 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.57□□□□□ -0.72
RPL39P62891 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 COX5A-206ENST00000568783 571 ntTSL 3 BASIC10.57□□□□□ -0.72
RPL39P62891 AC025048.3-201ENST00000590609 569 ntBASIC10.57□□□□□ -0.72
RPL39P62891 LINC01115-203ENST00000606068 577 ntBASIC10.57□□□□□ -0.72
RPL39P62891 AC074044.1-201ENST00000609673 707 ntBASIC10.57□□□□□ -0.72
RPL39P62891 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC10.57□□□□□ -0.72
RPL39P62891 AC005702.4-201ENST00000618393 416 ntBASIC10.57□□□□□ -0.72
RPL39P62891 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
RPL39P62891 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC10.57□□□□□ -0.72
RPL39P62891 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
RPL39P62891 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 AL365181.3-201ENST00000605886 3222 ntBASIC10.57□□□□□ -0.72
RPL39P62891 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
RPL39P62891 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.57□□□□□ -0.72
RPL39P62891 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
RPL39P62891 NUTM2HP-201ENST00000442076 2498 ntBASIC10.57□□□□□ -0.72
RPL39P62891 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC10.56□□□□□ -0.72
RPL39P62891 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
RPL39P62891 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
RPL39P62891 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
RPL39P62891 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 C8orf49-201ENST00000525043 1968 ntBASIC10.56□□□□□ -0.72
RPL39P62891 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
RPL39P62891 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 TSN-212ENST00000536142 3328 ntTSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
RPL39P62891 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
RPL39P62891 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
RPL39P62891 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
RPL39P62891 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC10.56□□□□□ -0.72
RPL39P62891 KRT18P32-201ENST00000424695 1287 ntBASIC10.56□□□□□ -0.72
RPL39P62891 RPL13P2-201ENST00000440687 659 ntBASIC10.56□□□□□ -0.72
RPL39P62891 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.56□□□□□ -0.72
RPL39P62891 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.56□□□□□ -0.72
RPL39P62891 TSFM-210ENST00000550559 897 ntTSL 5 BASIC10.56□□□□□ -0.72
RPL39P62891 AL079307.3-201ENST00000556114 283 ntBASIC10.56□□□□□ -0.72
RPL39P62891 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC10.56□□□□□ -0.72
RPL39P62891 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
RPL39P62891 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 AC027601.4-201ENST00000611259 610 ntBASIC10.56□□□□□ -0.72
RPL39P62891 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
RPL39P62891 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
RPL39P62891 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
RPL39P62891 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
RPL39P62891 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC10.56□□□□□ -0.72
RPL39P62891 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 IL9RP2-201ENST00000423948 1312 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms