Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 AC118758.2-201ENST00000614242 2813 ntBASIC12.81□□□□□ -0.36
AP3S2P59780 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.81□□□□□ -0.36
AP3S2P59780 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
AP3S2P59780 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
AP3S2P59780 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
AP3S2P59780 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.81□□□□□ -0.36
AP3S2P59780 KRT19P2-202ENST00000557173 1012 ntBASIC12.81□□□□□ -0.36
AP3S2P59780 PRELID1P1-202ENST00000567272 903 ntBASIC12.81□□□□□ -0.36
AP3S2P59780 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.81□□□□□ -0.36
AP3S2P59780 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.81□□□□□ -0.36
AP3S2P59780 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
AP3S2P59780 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.81□□□□□ -0.36
AP3S2P59780 AC093458.2-201ENST00000623150 629 ntBASIC12.81□□□□□ -0.36
AP3S2P59780 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
AP3S2P59780 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.81□□□□□ -0.36
AP3S2P59780 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 BEND3P3-201ENST00000611030 2440 ntBASIC12.81□□□□□ -0.36
AP3S2P59780 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.81□□□□□ -0.36
AP3S2P59780 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.81□□□□□ -0.36
AP3S2P59780 AC090643.2-201ENST00000623442 2029 ntBASIC12.81□□□□□ -0.36
AP3S2P59780 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
AP3S2P59780 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 MAPK10-262ENST00000641051 5738 ntBASIC12.81□□□□□ -0.36
AP3S2P59780 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
AP3S2P59780 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
AP3S2P59780 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S2P59780 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.8□□□□□ -0.36
AP3S2P59780 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.8□□□□□ -0.36
AP3S2P59780 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.8□□□□□ -0.36
AP3S2P59780 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 CLK3P2-201ENST00000427566 1453 ntBASIC12.8□□□□□ -0.36
AP3S2P59780 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 KRT18P67-201ENST00000432816 1264 ntBASIC12.8□□□□□ -0.36
AP3S2P59780 AC009947.1-201ENST00000444350 727 ntBASIC12.8□□□□□ -0.36
AP3S2P59780 FAM197Y8-203ENST00000450145 560 ntBASIC12.8□□□□□ -0.36
AP3S2P59780 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
AP3S2P59780 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
AP3S2P59780 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 AL358472.4-201ENST00000633140 710 ntBASIC12.8□□□□□ -0.36
AP3S2P59780 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
AP3S2P59780 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.8□□□□□ -0.36
AP3S2P59780 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.8□□□□□ -0.36
AP3S2P59780 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms