Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC004832.2-201ENST00000426397 482 ntBASIC13□□□□□ -0.33
CLDN12P56749 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13□□□□□ -0.33
CLDN12P56749 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13□□□□□ -0.33
CLDN12P56749 AL512361.1-201ENST00000554200 418 ntBASIC13□□□□□ -0.33
CLDN12P56749 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13□□□□□ -0.33
CLDN12P56749 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13□□□□□ -0.33
CLDN12P56749 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13□□□□□ -0.33
CLDN12P56749 AL109936.8-201ENST00000641772 604 ntBASIC13□□□□□ -0.33
CLDN12P56749 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13□□□□□ -0.33
CLDN12P56749 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN12P56749 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13□□□□□ -0.33
CLDN12P56749 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN12P56749 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CLDN12P56749 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDN12P56749 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 KRT8P14-201ENST00000414254 1442 ntBASIC12.99□□□□□ -0.33
CLDN12P56749 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN12P56749 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN12P56749 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CLDN12P56749 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CLDN12P56749 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN12P56749 HLA-K-203ENST00000430151 1046 ntBASIC12.99□□□□□ -0.33
CLDN12P56749 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.99□□□□□ -0.33
CLDN12P56749 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN12P56749 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN12P56749 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CLDN12P56749 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.99□□□□□ -0.33
CLDN12P56749 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN12P56749 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.99□□□□□ -0.33
CLDN12P56749 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN12P56749 MTDHP5-201ENST00000598980 586 ntBASIC12.99□□□□□ -0.33
CLDN12P56749 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDN12P56749 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CLDN12P56749 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CLDN12P56749 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CLDN12P56749 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN12P56749 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 AC111170.3-201ENST00000624282 2464 ntBASIC12.99□□□□□ -0.33
CLDN12P56749 Z82170.1-201ENST00000625081 3192 ntBASIC12.99□□□□□ -0.33
CLDN12P56749 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDN12P56749 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN12P56749 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.99□□□□□ -0.33
CLDN12P56749 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDN12P56749 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CLDN12P56749 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CLDN12P56749 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CLDN12P56749 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CLDN12P56749 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN12P56749 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN12P56749 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CLDN12P56749 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CLDN12P56749 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLDN12P56749 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.98□□□□□ -0.33
CLDN12P56749 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms