Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.07□□□□□ -0.64
CMC4P56277 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
CMC4P56277 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.07□□□□□ -0.64
CMC4P56277 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC11.07□□□□□ -0.64
CMC4P56277 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.07□□□□□ -0.64
CMC4P56277 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.07□□□□□ -0.64
CMC4P56277 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CMC4P56277 TUBB1P2-201ENST00000422712 1306 ntBASIC11.07□□□□□ -0.64
CMC4P56277 TUBB1P1-201ENST00000503144 1300 ntBASIC11.07□□□□□ -0.64
CMC4P56277 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.07□□□□□ -0.64
CMC4P56277 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CMC4P56277 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.07□□□□□ -0.64
CMC4P56277 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.07□□□□□ -0.64
CMC4P56277 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
CMC4P56277 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
CMC4P56277 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.06□□□□□ -0.64
CMC4P56277 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 AC011840.2-201ENST00000563063 1520 ntBASIC11.06□□□□□ -0.64
CMC4P56277 AL359258.3-201ENST00000622910 2331 ntBASIC11.06□□□□□ -0.64
CMC4P56277 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 RN7SKP230-201ENST00000365642 335 ntBASIC11.06□□□□□ -0.64
CMC4P56277 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 AC099336.1-201ENST00000417053 1171 ntBASIC11.06□□□□□ -0.64
CMC4P56277 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 RPS2P32-201ENST00000439199 892 ntBASIC11.06□□□□□ -0.64
CMC4P56277 CHMP1AP1-201ENST00000445563 662 ntBASIC11.06□□□□□ -0.64
CMC4P56277 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.06□□□□□ -0.64
CMC4P56277 Z93015.1-201ENST00000451718 390 ntBASIC11.06□□□□□ -0.64
CMC4P56277 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC11.06□□□□□ -0.64
CMC4P56277 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.06□□□□□ -0.64
CMC4P56277 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.06□□□□□ -0.64
CMC4P56277 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.06□□□□□ -0.64
CMC4P56277 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC11.06□□□□□ -0.64
CMC4P56277 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 AL023803.2-201ENST00000620080 638 ntBASIC11.06□□□□□ -0.64
CMC4P56277 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.06□□□□□ -0.64
CMC4P56277 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.06□□□□□ -0.64
CMC4P56277 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CMC4P56277 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CMC4P56277 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
CMC4P56277 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.06□□□□□ -0.64
CMC4P56277 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CMC4P56277 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.06□□□□□ -0.64
CMC4P56277 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.06□□□□□ -0.64
CMC4P56277 KRT8P4-201ENST00000509735 1454 ntBASIC11.06□□□□□ -0.64
CMC4P56277 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CMC4P56277 PTPRVP-205ENST00000641549 5067 ntBASIC11.05□□□□□ -0.64
CMC4P56277 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CMC4P56277 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CMC4P56277 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
CMC4P56277 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.05□□□□□ -0.64
CMC4P56277 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.05□□□□□ -0.64
CMC4P56277 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms