Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE1AP54750 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PDE1AP54750 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE1AP54750 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE1AP54750 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDE1AP54750 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.08■□□□□ 0.49
PDE1AP54750 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.08■□□□□ 0.48
PDE1AP54750 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PDE1AP54750 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE1AP54750 AL136309.1-201ENST00000403917 691 ntBASIC18.08■□□□□ 0.48
PDE1AP54750 AC112492.5-201ENST00000421897 457 ntBASIC18.08■□□□□ 0.48
PDE1AP54750 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.08■□□□□ 0.48
PDE1AP54750 CHMP1AP1-201ENST00000445563 662 ntBASIC18.08■□□□□ 0.48
PDE1AP54750 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE1AP54750 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE1AP54750 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PDE1AP54750 KRT17P8-201ENST00000540749 863 ntBASIC18.08■□□□□ 0.48
PDE1AP54750 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE1AP54750 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE1AP54750 AL512343.1-201ENST00000605837 169 ntBASIC18.08■□□□□ 0.48
PDE1AP54750 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.08■□□□□ 0.48
PDE1AP54750 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.08■□□□□ 0.48
PDE1AP54750 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.08■□□□□ 0.48
PDE1AP54750 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PDE1AP54750 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
PDE1AP54750 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PDE1AP54750 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.08■□□□□ 0.48
PDE1AP54750 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC18.08■□□□□ 0.48
PDE1AP54750 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PDE1AP54750 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.08■□□□□ 0.48
PDE1AP54750 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC18.08■□□□□ 0.48
PDE1AP54750 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDE1AP54750 KRT8P4-201ENST00000509735 1454 ntBASIC18.07■□□□□ 0.48
PDE1AP54750 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PDE1AP54750 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PDE1AP54750 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDE1AP54750 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
PDE1AP54750 KRT8P28-201ENST00000433288 1390 ntBASIC18.07■□□□□ 0.48
PDE1AP54750 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.07■□□□□ 0.48
PDE1AP54750 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDE1AP54750 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE1AP54750 AHCYP2-201ENST00000430630 1300 ntBASIC18.07■□□□□ 0.48
PDE1AP54750 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 ANKRD19P-201ENST00000338192 862 ntBASIC18.07■□□□□ 0.48
PDE1AP54750 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PDE1AP54750 AC026954.1-201ENST00000429771 1293 ntBASIC18.07■□□□□ 0.48
PDE1AP54750 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.07■□□□□ 0.48
PDE1AP54750 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.07■□□□□ 0.48
PDE1AP54750 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE1AP54750 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.07■□□□□ 0.48
PDE1AP54750 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDE1AP54750 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PDE1AP54750 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDE1AP54750 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PDE1AP54750 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.07■□□□□ 0.48
PDE1AP54750 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDE1AP54750 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE1AP54750 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE1AP54750 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDE1AP54750 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PDE1AP54750 GRK6P1-201ENST00000400595 1711 ntBASIC18.06■□□□□ 0.48
PDE1AP54750 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE1AP54750 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE1AP54750 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE1AP54750 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE1AP54750 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PDE1AP54750 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE1AP54750 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE1AP54750 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDE1AP54750 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE1AP54750 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE1AP54750 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.06■□□□□ 0.48
PDE1AP54750 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.06■□□□□ 0.48
PDE1AP54750 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE1AP54750 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.06■□□□□ 0.48
PDE1AP54750 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms