Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.01■□□□□ 0.47
NUP98P52948 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
NUP98P52948 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NUP98P52948 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 AC008741.2-201ENST00000612792 3115 ntBASIC18.01■□□□□ 0.47
NUP98P52948 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.01■□□□□ 0.47
NUP98P52948 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.01■□□□□ 0.47
NUP98P52948 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
NUP98P52948 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC18.01■□□□□ 0.47
NUP98P52948 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC18.01■□□□□ 0.47
NUP98P52948 RPS23-204ENST00000507980 836 ntTSL 2 BASIC18.01■□□□□ 0.47
NUP98P52948 IGHV1-12-201ENST00000518307 205 ntBASIC18.01■□□□□ 0.47
NUP98P52948 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.01■□□□□ 0.47
NUP98P52948 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.01■□□□□ 0.47
NUP98P52948 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC18.01■□□□□ 0.47
NUP98P52948 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NUP98P52948 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
NUP98P52948 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.01■□□□□ 0.47
NUP98P52948 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NUP98P52948 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
NUP98P52948 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NUP98P52948 LINC00265-2P-201ENST00000413372 782 ntBASIC18■□□□□ 0.47
NUP98P52948 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18■□□□□ 0.47
NUP98P52948 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18■□□□□ 0.47
NUP98P52948 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18■□□□□ 0.47
NUP98P52948 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
NUP98P52948 AC127024.7-201ENST00000625101 200 ntBASIC18■□□□□ 0.47
NUP98P52948 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
NUP98P52948 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC18■□□□□ 0.47
NUP98P52948 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 AC104640.1-201ENST00000562617 2109 ntBASIC18■□□□□ 0.47
NUP98P52948 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
NUP98P52948 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NUP98P52948 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18■□□□□ 0.47
NUP98P52948 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18■□□□□ 0.47
NUP98P52948 STK16-203ENST00000409516 895 ntTSL 2 BASIC18■□□□□ 0.47
NUP98P52948 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC18■□□□□ 0.47
NUP98P52948 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18■□□□□ 0.47
NUP98P52948 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 KRT8P2-201ENST00000556193 944 ntBASIC18■□□□□ 0.47
NUP98P52948 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC18■□□□□ 0.47
NUP98P52948 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NUP98P52948 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NUP98P52948 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18■□□□□ 0.47
NUP98P52948 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18■□□□□ 0.47
NUP98P52948 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.99■□□□□ 0.47
NUP98P52948 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
NUP98P52948 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NUP98P52948 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NUP98P52948 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.99■□□□□ 0.47
NUP98P52948 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.99■□□□□ 0.47
NUP98P52948 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.99■□□□□ 0.47
NUP98P52948 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NUP98P52948 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.99■□□□□ 0.47
NUP98P52948 AC068867.1-201ENST00000559855 150 ntBASIC17.99■□□□□ 0.47
NUP98P52948 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.99■□□□□ 0.47
NUP98P52948 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.99■□□□□ 0.47
NUP98P52948 AL021707.6-201ENST00000609212 491 ntBASIC17.99■□□□□ 0.47
NUP98P52948 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.99■□□□□ 0.47
NUP98P52948 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NUP98P52948 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NUP98P52948 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.99■□□□□ 0.47
NUP98P52948 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.99■□□□□ 0.47
NUP98P52948 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.99■□□□□ 0.47
NUP98P52948 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms