Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 AC244394.1-201ENST00000435000 1665 ntBASIC16.72■□□□□ 0.27
USP11P51784 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.72■□□□□ 0.27
USP11P51784 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
USP11P51784 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
USP11P51784 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.72■□□□□ 0.27
USP11P51784 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.72■□□□□ 0.27
USP11P51784 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.72■□□□□ 0.27
USP11P51784 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.72■□□□□ 0.27
USP11P51784 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.72■□□□□ 0.27
USP11P51784 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.72■□□□□ 0.27
USP11P51784 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.72■□□□□ 0.27
USP11P51784 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 RN7SL219P-201ENST00000582872 296 ntBASIC16.72■□□□□ 0.27
USP11P51784 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
USP11P51784 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 KRT8P29-201ENST00000420409 1371 ntBASIC16.72■□□□□ 0.27
USP11P51784 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.72■□□□□ 0.27
USP11P51784 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.72■□□□□ 0.27
USP11P51784 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
USP11P51784 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
USP11P51784 AC140479.7-201ENST00000636301 2332 ntBASIC16.71■□□□□ 0.27
USP11P51784 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
USP11P51784 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.71■□□□□ 0.27
USP11P51784 AL157407.1-201ENST00000435784 904 ntBASIC16.71■□□□□ 0.27
USP11P51784 AC012441.2-201ENST00000444843 739 ntBASIC16.71■□□□□ 0.27
USP11P51784 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.71■□□□□ 0.27
USP11P51784 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.71■□□□□ 0.27
USP11P51784 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.71■□□□□ 0.27
USP11P51784 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.71■□□□□ 0.27
USP11P51784 AC005730.2-201ENST00000564549 1184 ntBASIC16.71■□□□□ 0.27
USP11P51784 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.71■□□□□ 0.27
USP11P51784 MIR6720-201ENST00000611664 98 ntBASIC16.71■□□□□ 0.27
USP11P51784 MIR6799-201ENST00000620297 69 ntBASIC16.71■□□□□ 0.27
USP11P51784 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
USP11P51784 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
USP11P51784 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
USP11P51784 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.71■□□□□ 0.27
USP11P51784 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP11P51784 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.71■□□□□ 0.26
USP11P51784 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.7■□□□□ 0.26
USP11P51784 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
USP11P51784 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.7■□□□□ 0.26
USP11P51784 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.7■□□□□ 0.26
USP11P51784 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
USP11P51784 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.7■□□□□ 0.26
USP11P51784 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 AC232323.1-201ENST00000540724 2099 ntBASIC16.7■□□□□ 0.26
USP11P51784 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
USP11P51784 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.7■□□□□ 0.26
USP11P51784 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.7■□□□□ 0.26
USP11P51784 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
USP11P51784 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.7■□□□□ 0.26
USP11P51784 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.7■□□□□ 0.26
USP11P51784 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.7■□□□□ 0.26
USP11P51784 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.7■□□□□ 0.26
USP11P51784 AC104306.2-201ENST00000451877 341 ntBASIC16.7■□□□□ 0.26
USP11P51784 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.7■□□□□ 0.26
USP11P51784 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.7■□□□□ 0.26
USP11P51784 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
USP11P51784 AC022447.6-201ENST00000515522 438 ntBASIC16.7■□□□□ 0.26
USP11P51784 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.7■□□□□ 0.26
USP11P51784 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms