Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB28P51157 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB28P51157 AL354702.1-201ENST00000442006 1960 ntBASIC14.33□□□□□ -0.12
RAB28P51157 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB28P51157 AL390755.1-201ENST00000623716 2027 ntBASIC14.32□□□□□ -0.12
RAB28P51157 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 AC103702.1-201ENST00000548801 2630 ntBASIC14.32□□□□□ -0.12
RAB28P51157 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB28P51157 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RAB28P51157 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 BRWD1P1-201ENST00000401091 371 ntBASIC14.32□□□□□ -0.12
RAB28P51157 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 AL035414.1-201ENST00000451327 857 ntBASIC14.32□□□□□ -0.12
RAB28P51157 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.32□□□□□ -0.12
RAB28P51157 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.32□□□□□ -0.12
RAB28P51157 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB28P51157 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 DUX4L46-201ENST00000566845 751 ntBASIC14.32□□□□□ -0.12
RAB28P51157 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.32□□□□□ -0.12
RAB28P51157 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB28P51157 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB28P51157 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
RAB28P51157 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB28P51157 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
RAB28P51157 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAB28P51157 AL590440.2-201ENST00000641973 1595 ntBASIC14.31□□□□□ -0.12
RAB28P51157 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB28P51157 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAB28P51157 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
RAB28P51157 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAB28P51157 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB28P51157 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB28P51157 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 AL354877.1-201ENST00000424412 413 ntBASIC14.31□□□□□ -0.12
RAB28P51157 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB28P51157 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB28P51157 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB28P51157 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB28P51157 MIR6799-201ENST00000620297 69 ntBASIC14.31□□□□□ -0.12
RAB28P51157 AC027601.3-201ENST00000622907 509 ntBASIC14.31□□□□□ -0.12
RAB28P51157 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB28P51157 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RAB28P51157 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB28P51157 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms