Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SRP9P49458 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.29□□□□□ -0.28
SRP9P49458 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.29□□□□□ -0.28
SRP9P49458 DFFBP1-201ENST00000433250 979 ntBASIC13.29□□□□□ -0.28
SRP9P49458 KRT18P64-201ENST00000434946 1219 ntBASIC13.29□□□□□ -0.28
SRP9P49458 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SRP9P49458 SPTLC1P1-201ENST00000447199 261 ntBASIC13.29□□□□□ -0.28
SRP9P49458 SPDYE18-201ENST00000510091 1050 ntBASIC13.29□□□□□ -0.28
SRP9P49458 RARRES2P5-201ENST00000564013 466 ntBASIC13.29□□□□□ -0.28
SRP9P49458 RRP7BP-205ENST00000566851 833 ntBASIC13.29□□□□□ -0.28
SRP9P49458 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.29□□□□□ -0.28
SRP9P49458 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.29□□□□□ -0.28
SRP9P49458 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.29□□□□□ -0.28
SRP9P49458 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.29□□□□□ -0.28
SRP9P49458 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SRP9P49458 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.29□□□□□ -0.28
SRP9P49458 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SRP9P49458 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
SRP9P49458 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SRP9P49458 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SRP9P49458 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SRP9P49458 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SRP9P49458 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.29□□□□□ -0.28
SRP9P49458 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
SRP9P49458 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.28□□□□□ -0.28
SRP9P49458 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.28□□□□□ -0.28
SRP9P49458 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.28□□□□□ -0.28
SRP9P49458 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.28□□□□□ -0.28
SRP9P49458 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.28□□□□□ -0.28
SRP9P49458 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SRP9P49458 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 PIN1P1-201ENST00000412108 996 ntBASIC13.28□□□□□ -0.28
SRP9P49458 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.28□□□□□ -0.28
SRP9P49458 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.28□□□□□ -0.28
SRP9P49458 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.28□□□□□ -0.28
SRP9P49458 AC104596.2-201ENST00000512793 793 ntBASIC13.28□□□□□ -0.28
SRP9P49458 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.28□□□□□ -0.28
SRP9P49458 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.28□□□□□ -0.28
SRP9P49458 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.28□□□□□ -0.28
SRP9P49458 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.28□□□□□ -0.28
SRP9P49458 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.28□□□□□ -0.28
SRP9P49458 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 AC015910.1-201ENST00000579400 975 ntBASIC13.28□□□□□ -0.28
SRP9P49458 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.28□□□□□ -0.28
SRP9P49458 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SRP9P49458 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SRP9P49458 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SRP9P49458 AC007541.1-201ENST00000570282 1469 ntBASIC13.28□□□□□ -0.28
SRP9P49458 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.28□□□□□ -0.28
SRP9P49458 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 AL121723.1-201ENST00000445194 1519 ntBASIC13.28□□□□□ -0.28
SRP9P49458 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
SRP9P49458 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SRP9P49458 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.28□□□□□ -0.28
SRP9P49458 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SRP9P49458 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
SRP9P49458 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SRP9P49458 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SRP9P49458 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SRP9P49458 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SRP9P49458 AC019294.4-201ENST00000561777 2905 ntBASIC13.27□□□□□ -0.28
SRP9P49458 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SRP9P49458 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SRP9P49458 AC023090.2-201ENST00000625182 2110 ntBASIC13.27□□□□□ -0.28
SRP9P49458 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SRP9P49458 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SRP9P49458 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 AL353779.1-201ENST00000434793 351 ntBASIC13.27□□□□□ -0.29
SRP9P49458 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 GNAQP1-201ENST00000444815 1067 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms