Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.02□□□□□ -0.17
GABRA4P48169 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.02□□□□□ -0.17
GABRA4P48169 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRA4P48169 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 AC009884.2-201ENST00000603110 324 ntBASIC14.02□□□□□ -0.17
GABRA4P48169 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.02□□□□□ -0.17
GABRA4P48169 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.02□□□□□ -0.17
GABRA4P48169 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.02□□□□□ -0.17
GABRA4P48169 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
GABRA4P48169 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
GABRA4P48169 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
GABRA4P48169 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GABRA4P48169 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
GABRA4P48169 FGD5P1-202ENST00000614866 2498 ntBASIC14.02□□□□□ -0.17
GABRA4P48169 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GABRA4P48169 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA4P48169 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
GABRA4P48169 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
GABRA4P48169 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.01□□□□□ -0.17
GABRA4P48169 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
GABRA4P48169 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 CYP4F23P-201ENST00000593402 1579 ntBASIC14.01□□□□□ -0.17
GABRA4P48169 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
GABRA4P48169 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
GABRA4P48169 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.01□□□□□ -0.17
GABRA4P48169 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.01□□□□□ -0.17
GABRA4P48169 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.01□□□□□ -0.17
GABRA4P48169 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.01□□□□□ -0.17
GABRA4P48169 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.01□□□□□ -0.17
GABRA4P48169 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.01□□□□□ -0.17
GABRA4P48169 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.01□□□□□ -0.17
GABRA4P48169 NDUFV2P1-201ENST00000596415 907 ntBASIC14.01□□□□□ -0.17
GABRA4P48169 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
GABRA4P48169 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.01□□□□□ -0.17
GABRA4P48169 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.01□□□□□ -0.17
GABRA4P48169 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
GABRA4P48169 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.01□□□□□ -0.17
GABRA4P48169 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
GABRA4P48169 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.01□□□□□ -0.17
GABRA4P48169 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.01□□□□□ -0.17
GABRA4P48169 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRA4P48169 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 AC136759.1-202ENST00000530858 2194 ntBASIC14□□□□□ -0.17
GABRA4P48169 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 AC006504.5-208ENST00000588784 2401 ntBASIC14□□□□□ -0.17
GABRA4P48169 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
GABRA4P48169 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14□□□□□ -0.17
GABRA4P48169 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14□□□□□ -0.17
GABRA4P48169 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 SPTLC1P5-201ENST00000450718 252 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms